Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00667 tgcttcaaacacaatggcatggtggtttggcctgttttttatcaagtggaaccatctgacgttcgtcatcaaaaaggaagctatgcagaagcactcaccgagcatgaaagcagaatcagtgacaagaataagataaaaaaatggaggtcagttttgcaagcagcagctaatctatccggttggcatttcaaacaagggtatgcaaataaGTGCGAATGTGAAATCATTGGAAAGATCATTCAAGAAGTCTCTAAAAGGATCAACCGTAACACTTTACATGTTACTCATTACCCAGTTGGGTTAGAGTCTCGCGTCCAAAAGAGCAAGGGATCCGATAAAACTGAGATCATCATGCTACACTTGCCTAAAGTTAAAGAAGTGCAATGGGATGGAACCGCATTGGAGAAGATGGAAAACCTTAAAATATTGGTGGTAGAAAATGCTCACTTTTCTAGAGGACCTAGTGTTCTCCCAAAAAGTTTAAGAGTGCTAAAATGGACTGCATATCCTGAATCATCCTTACCTGCTAATTTTGATCCAAAGAAACTTGTCATATTGGACTTGCCTATGAGTTATTTTACATTCGCGGATCAAGTGATCATGAAATTCAAGTCTTTGATGGAAATGAACTTAAGTGGATGCGAATTACTAAAGAAAATGCCTGACATGTCTGGAGCACCAAATCTGAAGAAACTGGATCTTCAATGTTGCAGAAACTTAGTTGAAATTCATGACTCCGATGGATTGCTTAATAGACTTGAATGGTTGAACCTTCATAATTGCACAAGTCTCACGAGTTTTCCAGAAATTTTAGGGAAGATGGAAAAAATGCGTTTCCTTGATTTGAGTGATAGTGGTATACGTGGCTTGCCTTTTTCAATTGGAAATCTAGTTGGACTCAAATACCTGTATCTCGATGGATGCAAATGGCTACTTGAACTACCAAGTAGTATTTTTACGCTGCAACTTAAGCGTTTGGAAGCTAAGTATTGTGAGAGGCTTGCTCTAGTTCAGAATGGGGAAGGTCAAGGTCAAGAAATAATGTCTTCAAGTGCCAACTCTATGAGTTATATTAATTTTGAGTGTTGTTATCACTTGACAGATCAATTTCTTTGCCCAGTTCTTCCTTGGATGCGCAATGTAACAATCCTATCCCTTAATTACAGCAATATCACAATCCTTCCATCATCCATCAGTGTCTGTCTCTCCTTGAAAGCACTTTATTTGAATGGATGCAAGCGGCTTCGAGAAATCAGAGGCCTTCCACCAAACTTTAAAATTCTTTCAGCTTTCAATTGCCTATCTTTATCTTCCGAATCTAATGAAATGTTACTGAATGAGAGACTACACGAGAATAGGGGCAGAAGTTTCATATTTCCAGGATCAAGTATGCCAAGTTGGTTGAATTGCAGTAGCAAGGGTCCATCCTTGCGTTTCTGGTTTCGTAACAAGTTCCCGCCAATTACTCTATGTGCTGCTGGACTTCACCCTCGCTCTATGAGACACCTGATGGTTAATGGCATATTACAGATACCACTAATTTTCACGGGTGGAGATGGTTGGAAGCAGTATGAGACAAATCATACTTTTGTGTATGATGGGCTCGAAATAGGAGATATTGAAAATGAAGGATTACGTGTTAGGAATGGATGGAAACTTGCTGAGATTGTTCTGTTGCCTGATAGAAAGAACTCTGGAATGAAGAAGGAAGTGGCAGTGGAAATGTGCTTCCTTTATCAAATAAAAGACCAAAATTTCAATAGGCCACTCTGCCAAGAGGTAACATTCCTCGAATATGGAACTTATGTTGATGTCCTGTACATGAAGATGACGAGAT 1837 0.3478 CFKHNGMVVWPVFYQVEPSDVRHQKGSYAEALTEHESRISDKNKIKKWRSVLQAAANLSGWHFKQGYANKCECEIIGKIIQEVSKRINRNTLHVTHYPVGLESRVQKSKGSDKTEIIMLHLPKVKEVQWDGTALEKMENLKILVVENAHFSRGPSVLPKSLRVLKWTAYPESSLPANFDPKKLVILDLPMSYFTFADQVIMKFKSLMEMNLSGCELLKKMPDMSGAPNLKKLDLQCCRNLVEIHDSDGLLNRLEWLNLHNCTSLTSFPEILGKMEKMRFLDLSDSGIRGLPFSIGNLVGLKYLYLDGCKWLLELPSSIFTLQLKRLEAKYCERLALVQNGEGQGQEIMSSSANSMSYINFECCYHLTDQFLCPVLPWMRNVTILSLNYSNITILPSSISVCLSLKALYLNGCKRLREIRGLPPNFKILSAFNCLSLSSESNEMLLNERLHENRGRSFIFPGSSMPSWLNCSSKGPSLRFWFRNKFPPITLCAAGLHPRSMRHLMVNGILQIPLIFTGGDGWKQYETNHTFVYDGLEIGDIENEGLRVRNGWKLAEIVLLPDRKNSGMKKEVAVEMCFLYQIKDQNFNRPLCQEVTFLEYGTYVDVLYMKMTR 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00667 612 PANTHER ARCHAEAL ATPASE 114 492 - -
Cca06g00667 612 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 61 IPR035897 -
Cca06g00667 612 PANTHER ARCHAEAL ATPASE 6 107 - -
Cca06g00667 612 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 114 492 IPR044974 GO:0006952
Cca06g00667 612 SUPERFAMILY L domain-like 115 444 - -
Cca06g00667 612 Gene3D - 1 95 IPR035897 -
Cca06g00667 612 Pfam TIR domain 4 90 IPR000157 GO:0007165
Cca06g00667 612 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 107 IPR044974 GO:0006952
Cca06g00667 612 Gene3D Ribonuclease Inhibitor 273 459 IPR032675 -
Cca06g00667 612 Gene3D Ribonuclease Inhibitor 120 272 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00667 Cca-Chr6 18477659 18547824 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00667 110 414 WRKY Transcription Factor Family AT4G12020 29.191 4.61e-19 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00667 - - ccaj:109800328 627.091