Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00662 ATGGATGGTAGTGTTCTAAGCTCTCCAAGATATACTGCATGTGATGAGAATCCATCCTTGGTGTCTTGGATCATTAAAGTGTTTGTCTCGTGGGATACTTCACCAGCTTTTGGAGGCATCAGGATTCTCAGCAGACCAAGAATTCCAGTACCCTTCCCTGATCCCTCTGGAGATTACATTGTTCTCATTGGAGATTGGTACAAATCCAACCACACGATAATTACACTTGTGTCTCCAGCCTTATATGGAGACAGTAAAACGAGATTAACTGGCTTTTGGAAAGTCCAAGGAGATCAAAAATCTGCTGGATGCTTTAATGTGCTGTGCCCGGGTTTTATCCAAGTCCATCAAACTGTTGGCTTTGGAACTATCCTTGAGCCTTCTCAAACTGGATCGACAATAAAATTATATTTAAATTTTATAATCGAACAGCTGATGGCATTTCGTATCGGAGCCAAACTCAAAAAAATCTCCCATGGTGGGCTTGATTGGTTTGCTTCTGGAAGTAGAATTATTCTAACAACTAGAGATATCCATTTGTTGCATGTTTATGGTGTTGAAAGAACTTATGAAGTAGAGGAGCTAAATCATGAAGAAGCCCTTGAATTGTTCAGCTGGAATGCTTTCAAAAGCAAACAAGTTAATCTTGGTTATCTGGAAATTTCAAAGAGAGCAATTCTAATGGCCTACCATTATCTCTGGAACTAA 708 0.3955 MDGSVLSSPRYTACDENPSLVSWIIKVFVSWDTSPAFGGIRILSRPRIPVPFPDPSGDYIVLIGDWYKSNHTIITLVSPALYGDSKTRLTGFWKVQGDQKSAGCFNVLCPGFIQVHQTVGFGTILEPSQTGSTIKLYLNFIIEQLMAFRIGAKLKKISHGGLDWFASGSRIILTTRDIHLLHVYGVERTYEVEELNHEEALELFSWNAFKSKQVNLGYLEISKRAILMAYHYLWN 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00662 235 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 154 226 IPR044974 GO:0006952
Cca06g00662 235 PANTHER ARCHAEAL ATPASE 154 226 - -
Cca06g00662 235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 226 IPR027417 -
Cca06g00662 235 Pfam Neprosin 77 141 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00662 Cca-Chr6 18391869 18396828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00662 160 229 WRKY Transcription Factor Family AT5G45050 38.571 6.82e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00662 - - ccaj:109795910 139.428