Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00657 ATGCTACACTTGCCTAAAGTTAAAGAAGTGCAATGGGATGGAATCGCATTGGAGAATATGGAAAACTTCAAAATATTGGTGGTAGAAAATATTCACTTTTCTAGAGGACCTAGTGCTCTCCCAAAAAGTTTAAGAGTGCTAAAATGGAGCCTATATCCTGAACCATCCTTGCCTACTAATTTTGATCCAAAGAAACTTGTCATATTGGACATGCCTATGAGTTCCTTTACATTCAAGAATCAACTGAACATGAAATTCAAGTCTTTGATAGAAATGAATTTCAGTGGTTGCCAATTACTAAAAGAAATACCCGACATGTCTGGAGCACCAAATTTGAAGAAATTGCATCTTGTTAATTGCAAAAATTTAGTTGAAGTTCATGATTCTGTTGGATTCCTTGATAAACTGGAATATTTGAATCTTGATGATTGCAGCAGTCTTAGGATTCTTCCCTATGGCATGAACTTAACTTCTCTTAAGAACATGTACCTTATGAATTGCACAAGTCTGAGGAGTTTTCCAAAAATTTTAGGGAAGATGGAAAACATAGATTCACTTTATTTGAGTGGTAGTGACATAAGTGGCTTGCCTTTTTCAATTGAAAATCTAGTTGGACTCAAATTCCTGGGTCTCAATGGATGCAGATGGCTACTTGAACTACCAAGTAGTATTTTTAAGCTGCCACTACTTAAGATGTTGGGTGCTGACTTTTGTGAGCGGCTTGCTCGAGTTCAGAATGGGGAAGGTCAAGGTCAAGTAACAATGTCTTCAAGTGTGGACTATGTTAATTTTAATCATTGTTATCATTTGACAGATCAATTTCTTTGCACAGTTCTTCCTTGGTTGCACAATGTAACATATCTATCCCTTAGTTATAGTAATATCACAATCCTTCCATCATCCATCAGTGTCTGTGTCTCCTTAAAAACACTTTATTTGAATGGATGCAAGGAGCTTCGAGAAATCAAAGGCCTTCCACCAAACATAAAAAATCTTTCAGCTATCAATTGCACATCTTTATCTTCTGAGTCTAATGAAATGTTACTGAATGAGAGACTACACGAGAATGGGGGCACATATTTCGAATTTACAGGATCAAGTATGCCAAGTTGGTTGAATTGCAGTAACAAGGGTCCATCCCTGCGTTTCTGGTTTCGTAACAAGTTCCCAGCATTAACTCTATGTGCTGCTGGACTTTTTTATTCAATATATGACAATAAGTGGGCCTGGCGCCTGAAGGTTAATGGCGTGCTACTGCCCCGAACAGATGGATTACATATTAAGAATGGATGGAACAGTGCTGAGATTTTGTTTGGTGGTTATGGAGCAAAAGATATAGAATGGATGGGAGTACATGTACAGGAACAAAAAACAAACATGGCAGATATCCAATTTACAAATCCTGACTTTTCAATGGTAGACAATTTAGTACGTGAAGGAGAGGAAAGTGATCAAGAAGAAAGTGGTAGTCGATATGTGCTTGCTTTATCAAATAAAAGACAAAAACTTCGCCACCCTGCCAAGAGGGAGATCCTTATAGTCCCATCTCAGAGGTCTCCTTGGGTTCGTGCTTATTGCGATGGAGCACATTCACACCGAACTAATAAGACTGCTTGTGGAGGCTTGCTTATTAATCATTCAGGCATGTATGCAGGGGGGTTTGCTCGTTCTCTAGAGGGATCTGATAAAACTGAGATCATCATGCTACACTTGCCTAAAGTTAAAGAAGTGCAATGGGATGGAATCGCATTGGAGAATATGGAAAACTTCAAAATATTGGTGGTAGAAAATATTCACTTTTCTAGAGGACCTAGTGCTCTCCCAAAAAGTTTAAGAGTGCTAAAATGGAGCCTATATCCTGAACCATCCTTGCCTACTAATTTTGATCCAAAGAAACTTGTCATATTGGACATGCCTATGAGTTCCTTTACATTCAAGAATCAACTGAACATGAAATTCAAGTCTTTGATAGAAATGAATTTCAGTGGTTGCCAATTACTAAAAGAAATACCCGACATGTCTGGAGCACCAAATTTGAAGAAATTGCATCTTGTTAATTGCAAAAATTTAGTTGAAGTTCATGATTCTGTTGGATTCCTTGATAAACTGGAATATTTGAATCTTGATGATTGCAGCAGTCTTAGGATTCTTCCCTATGGCATGAACTTAACTTCTCTTAAGAACATGTACCTTATGAATTGCACAAGTCTGAGGAGTTTTCCAAAAATTTTAGGGAAGATGGAAAACATAGATTCACTTTATTTGAGTGGTAGTGACATAAGTGGCTTGCCTTTTTCAATTGAAAATCTAGTTGGACTCAAATTCCTGGGTCTCAATGGATGCAGATGGCTACTTGAACTACCAAGTAGTATTTTTAAGCTGCCACTACTTAAGATGTTGGGTGCTGACTTTTGTGAGCGGCTTGCTCGAGTTCAGAATGGGGAAGGTCAAGGTCAAGTAACAATGTCTTCAAGTGTGGACTATGTTAATTTTAATCATTGTTATCATTTGACAGATCAATTTCTTTGCACAGTTCTTCCTTGGTTGCACAATGTAACATATCTATCCCTTAGTTATAGTAATATCACAATCCTTCCATCATCCATCAGTGTCTGTGTCTCCTTAAAAACACTTTATTTGAATGGATGCAAGGAGCTTCGAGAAATCAAAGGCCTTCCACCAAACATAAAAAATCTTTCAGCTATCAATTGCACATCTTTATCTTCTGAGTCTAATGAAATGTTACTGAATGAGGGATCTGATAAAACTGAGATCATCATGCTACACTTGCCTAAAGTTAAAGAAGTGCAATGGGATGGAATCGCATTGGAGAATATGGAAAACTTCAAAATATTGGTGGTAGAAAATATTCACTTTTCTAGAGGACCTAGTGCTCTCCCAAAAAGTTTAAGAGTGCTAAAATGGAGCCTATATCCTGAACCATCCTTGCCTACTAATTTTGATCCAAAGAAACTTGTCATATTGGACATGCCTATGAGTTCCTTTACATTCAAGAATCAACTGAACATGGTATTATTAGTAGCTAACAATCTTGGGTTCTTGATGTTTATTTGGTCTTGGATATTAATAAGTTATAACTCCATTTGA 3108 0.3726 MLHLPKVKEVQWDGIALENMENFKILVVENIHFSRGPSALPKSLRVLKWSLYPEPSLPTNFDPKKLVILDMPMSSFTFKNQLNMKFKSLIEMNFSGCQLLKEIPDMSGAPNLKKLHLVNCKNLVEVHDSVGFLDKLEYLNLDDCSSLRILPYGMNLTSLKNMYLMNCTSLRSFPKILGKMENIDSLYLSGSDISGLPFSIENLVGLKFLGLNGCRWLLELPSSIFKLPLLKMLGADFCERLARVQNGEGQGQVTMSSSVDYVNFNHCYHLTDQFLCTVLPWLHNVTYLSLSYSNITILPSSISVCVSLKTLYLNGCKELREIKGLPPNIKNLSAINCTSLSSESNEMLLNERLHENGGTYFEFTGSSMPSWLNCSNKGPSLRFWFRNKFPALTLCAAGLFYSIYDNKWAWRLKVNGVLLPRTDGLHIKNGWNSAEILFGGYGAKDIEWMGVHVQEQKTNMADIQFTNPDFSMVDNLVREGEESDQEESGSRYVLALSNKRQKLRHPAKREILIVPSQRSPWVRAYCDGAHSHRTNKTACGGLLINHSGMYAGGFARSLEGSDKTEIIMLHLPKVKEVQWDGIALENMENFKILVVENIHFSRGPSALPKSLRVLKWSLYPEPSLPTNFDPKKLVILDMPMSSFTFKNQLNMKFKSLIEMNFSGCQLLKEIPDMSGAPNLKKLHLVNCKNLVEVHDSVGFLDKLEYLNLDDCSSLRILPYGMNLTSLKNMYLMNCTSLRSFPKILGKMENIDSLYLSGSDISGLPFSIENLVGLKFLGLNGCRWLLELPSSIFKLPLLKMLGADFCERLARVQNGEGQGQVTMSSSVDYVNFNHCYHLTDQFLCTVLPWLHNVTYLSLSYSNITILPSSISVCVSLKTLYLNGCKELREIKGLPPNIKNLSAINCTSLSSESNEMLLNEGSDKTEIIMLHLPKVKEVQWDGIALENMENFKILVVENIHFSRGPSALPKSLRVLKWSLYPEPSLPTNFDPKKLVILDMPMSSFTFKNQLNMVLLVANNLGFLMFIWSWILISYNSI 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00657 1035 Gene3D Ribonuclease Inhibitor 812 1021 IPR032675 -
Cca06g00657 1035 PANTHER ARCHAEAL ATPASE 563 918 - -
Cca06g00657 1035 PANTHER ARCHAEAL ATPASE 9 389 - -
Cca06g00657 1035 Gene3D Ribonuclease Inhibitor 2 246 IPR032675 -
Cca06g00657 1035 Gene3D Ribonuclease Inhibitor 554 811 IPR032675 -
Cca06g00657 1035 PANTHER ARCHAEAL ATPASE 923 998 - -
Cca06g00657 1035 SUPERFAMILY L domain-like 565 913 - -
Cca06g00657 1035 SUPERFAMILY L domain-like 8 348 - -
Cca06g00657 1035 Gene3D Ribonuclease Inhibitor 249 377 IPR032675 -
Cca06g00657 1035 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 923 998 IPR044974 GO:0006952
Cca06g00657 1035 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 563 918 IPR044974 GO:0006952
Cca06g00657 1035 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 389 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00657 Cca-Chr6 18303026 18352057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00657 598 878 WRKY Transcription Factor Family AT4G12020 32.526 7.01e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00657 - - ccaj:109800328 843.573