Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00650 ATGACAATTATTCAAAATGAACAACTTAAACATGGTCCACAAGAAAAGTGGTTTAAGAATTTTCATGACAACTTTGATCTGAACGTGACTGCTCAAGAGATGGAGCAGCAGCCTCATTTGCAGTGGGAATTATTAGAAAATCACTATAGCCAATATAGTGAAATGTCTGGAAAGATGGAGAAGCACAGAGATAACATTAGTTTGGAAGACCAACAACAAGGAAGTCAGGTACCTAGGACAAAGGCTTTTAAGAGGTGTGTTGGTGACTTGTTGATTCTTGCACAATCTGCTGAGATAGTAGCACAATCTGAATATAATGTGGCCGGGGTGCATTCAAATAACCAAGAAAATACAGACTTACACAGCGACCTGGTTGATCAAATGCCACAAAAATGTCCTAGCAATATAAATGTGGATGTTACCAGAACCCGCTTAACCAAAATTCGGAAGCAAGCTAGATGTAAACATCTTGTATTGGACCAAGAGAGGGCTGAGGAAAGCCCCTTCAAACATTCACAAGGAAAAACAACCCGCCTGAACCAAATAAAGCATCAAGCTCGTTGCAAAAGTAAGAATGATTTGTCACCTCAAATGATAAGCAGACTCAAAGATGAGCAGCCAAAAGGTAGAATACTTCGACTAAGCCAGATGAAACATCAAGCTCGGTTCAAATTTAATTCAACAGTGAAAGATGGGACTGAGGCACAAATAGATGAGAGTCTGCCTCACAACAGCATTAAAGTGATTGATATTGACTTTCATGCTATTTGTATTTATCTTCCAGATTCCAATCCTTCTGTTGAAGGTGTACCTGCACATAACTTTTACAGAGGAGCCAGTCAATCATCTATTGTAAGGTGGGATATTGAAAATCTTAAGGAACATCAACGTACTGCAAGGCGGTTAAGAGCATTGAAGACTAAAAAACTGAGGCAACAAAATTATTCCAGTGCGAGATTGCATGCAATGAGGGCAAGCCTGACTGGGTTAACAGCAAACTTGGAAGCTCAAAAGGAATTTATGCCTGTGAAAAGATTACGCCTAACTCAATTGAGACACGAAGCTCGTTTAGGGAATCGCTATTCTGCTATGCAAGGACTGCCTGGAAAATATAGTCAAATGGAACAAGACAAGATGAGATTTGGTAAGAGAGAACATCGCCGCCGCCGCCACCCTTCCGGCGATGACATACCACCGCCTCCCCTCATTCCTACGCCGTTGATGCGCCGATCCAACGCCCGCACTCGCGTCAATCGCAACAACAACAGCCAAATGGATCCGATCAAAATCCGCTCCACCAACCTCTTCGCCCGGAACCCTAAGCcctcttcttcgcgctctctcctcatcttcctccccctcgctctctcccttcttctcattctctcctactacgcgttctcctcctcctcgctccGCGCCGCTTTCCGCTACCGGATAATCGTCGACGGCGGGAGCACGGGCACGCGCGTCCACGTGTTCAAGTACCGGTCGGACCGGGAGCTGGAGTTCGGGGAGGAGGGGCTGGCGTCGATGCGGGTCAACCCCGGGCTGTCGGCGTTCGCGGAGGATCCTGGTGGCGCCGGCGGGTCGGTGGCGGAGCTGGTGGAGTTCGGGAAGAGGCGGATCCCGAGGGCGAGTTGGGGGGAGACGGAGATTCGCTTGATGGCCACGGCGGGGCTGAGGATGCTCGACGCGGAGGGAATGACTGTTTTGTTGGTGTCCGTGAGGGCGGGGTTTGATGACTTGAGGGGGAAAGTTGGGCTGGCAATCATGCCTAAGTTCTTGTTGTCAGCAAAATCACGATGTTCTGATGAAGGAGTGTATGCTTGGGTTGTTGCTAATTATGCACTTGGCACTCTTGGAGGTGATCCTTTGGATACAACTGGGATTATTGAACTTGGTGGTGCTTCTGCTCAGGTACAACTTCATGTTTTCTGA 1941 0.4493 MTIIQNEQLKHGPQEKWFKNFHDNFDLNVTAQEMEQQPHLQWELLENHYSQYSEMSGKMEKHRDNISLEDQQQGSQVPRTKAFKRCVGDLLILAQSAEIVAQSEYNVAGVHSNNQENTDLHSDLVDQMPQKCPSNINVDVTRTRLTKIRKQARCKHLVLDQERAEESPFKHSQGKTTRLNQIKHQARCKSKNDLSPQMISRLKDEQPKGRILRLSQMKHQARFKFNSTVKDGTEAQIDESLPHNSIKVIDIDFHAICIYLPDSNPSVEGVPAHNFYRGASQSSIVRWDIENLKEHQRTARRLRALKTKKLRQQNYSSARLHAMRASLTGLTANLEAQKEFMPVKRLRLTQLRHEARLGNRYSAMQGLPGKYSQMEQDKMRFGKREHRRRRHPSGDDIPPPPLIPTPLMRRSNARTRVNRNNNSQMDPIKIRSTNLFARNPKPSSSRSLLIFLPLALSLLLILSYYAFSSSSLRAAFRYRIIVDGGSTGTRVHVFKYRSDRELEFGEEGLASMRVNPGLSAFAEDPGGAGGSVAELVEFGKRRIPRASWGETEIRLMATAGLRMLDAEGMTVLLVSVRAGFDDLRGKVGLAIMPKFLLSAKSRCSDEGVYAWVVANYALGTLGGDPLDTTGIIELGGASAQVQLHVF 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00650 646 Gene3D - 477 601 - -
Cca06g00650 646 Gene3D Exopolyphosphatase. Domain 2 602 642 - -
Cca06g00650 646 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 447 642 IPR000407 GO:0016787
Cca06g00650 646 PANTHER APYRASE 6-RELATED 447 642 - -
Cca06g00650 646 MobiDBLite consensus disorder prediction 381 412 - -
Cca06g00650 646 Pfam GDA1/CD39 (nucleoside phosphatase) family 476 642 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00650 Cca-Chr6 18211050 18219180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00650 470 645 Calmodulin-binding Proteins AT3G04080 33.898 1.63e-19 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00650 K01510 - gmx:102660588 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00650 06 18211050 18219180 Cca06g00650 06 18211050 18219180 ECH