Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00622 ATGGGCTTGGATCCCATTACTCACAAACCAAAAGCCAACACCTTTGAAAACTGTGGTGGTGAACAATCTAAGGAAGCTATCAATATGAATCACATTACACAATGGGAGAGTGTTAGACTTGAAGCTGAAGCCAGAGAATCTACATTGCATGTTGGATCTAGCTTCTTCCATTCTCCACAGCTAATATTAAGCAAATTTCCCACTCAACCTCAAAGTTCACCAGATTCCCTATCAACCAAATATAACACCACAAACACAATGCATAGCATGTATGCCCTCATGCTTGCCACAGATCCTTGCCTTCCATCACCAATATCTACGTTGACCTTTCCAAAGTTACCTATCCCTACAAATGTGACACAATTCACCAACTCCAAAAGCTCACTCTCATCATGTAAGGGTGGTGATGATCATGTCATAGAAACTAGTAATCATAATCAAAAGATAATAACAGAAGACTGTGTGTCAAGCATGCAAGATGACGACATTATGGTGGTTGTGGATGCAATACTTAGAACAGAAAGATGTGAGAGTATTGAAGAGTTGTTAAACGGGTCCACTACCATGGAAGGTCTAATTAATGATTCAATTGAAAGTGATAGAAGCGTAGGCACATAA 618 0.3964 MGLDPITHKPKANTFENCGGEQSKEAINMNHITQWESVRLEAEARESTLHVGSSFFHSPQLILSKFPTQPQSSPDSLSTKYNTTNTMHSMYALMLATDPCLPSPISTLTFPKLPIPTNVTQFTNSKSSLSSCKGGDDHVIETSNHNQKIITEDCVSSMQDDDIMVVVDAILRTERCESIEELLNGSTTMEGLINDSIESDRSVGT 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00622 205 MobiDBLite consensus disorder prediction 1 20 - -
Cca06g00622 205 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 77 178 - -
Cca06g00622 205 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 53 - -
Cca06g00622 205 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 77 178 - -
Cca06g00622 205 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00622 Cca-Chr6 17742753 17743370 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00622 1 118 MYB Transcription Factor Family AT3G01140 38.095 2.12e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00622 K09422 - gmx:100792464 181.415