Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca06g00599 | ATGGCTGGCGCCGGAAATGGGGGCCTCCCGCCGTGGAAGGAGGCGCCGCCGCCGCCTCGACCCACCATCAGCCTCCCTCCGCGGCCTGCTTCCATGGACACCCTTTTCACCGGCGGCTTCAGCCCCGGCCCCATGACTCTTCTCTCCAACTTTCTCGCTGATGGGGATGACTGCAAGTCCTTCTCTCAGCTCCTCGCCGGAGCTATGACGTCTCCGGTCACCGGCGCCGCCGTACTTGACTCACCTGCTGGCCTCTTCTCGCCCAATCAGGTGTCTTTTGGAATGACACACCAGCAGGCCCTAGCACAGGTCTCAGTTCAGGCTGCACACACCAACTCAAATATCCACATCCAGCCTCAACATTCACTGCCTCTATCAGTATCACAGGTTCCTGCAGCAGCTGCTTCCAACACCACACAACACCTGATACCACCCTTATCTGCAGACTCTTGGGCTGCAATGGCCGAATCCGCCGATCATTCTCACGCCGAACAAAGATCTCAATCTTCATCGATGAACGTCGACAAGCCTGCAGATGATGGCTACAACTGGAGGAAGTATGGCCAGAAACAGGTGAAGGGTAGCGAGTTTCCTAGAAGCTATTACAAGTGCACACATCCAAACTGTCCTGTGAAGAAAAAAGTGGAGCGGTCGCTTGAGGGTCACGTAACTGCGATTATATACAAAGGAGAACACAATCACCAACGTCCTCAGCCTAACAAGCGCTCCAAAGACACCATCATGGCTTCAAATGAAAATGAAAATGTGCAAGGGAATGTGGATTCATCTCATCAAGGGGCAAGCACAAACTCGATGATGAAGATGGATCCTGAGTCGAGTCAGGCAACGGCAGATCGGCTATCAGGAACAAGTGACAGTGAGGAAGTTGGTGATCATGAAACTGAAGTTGATGAGAAGAATGTTGAGCTTGACCCCAAGAGGAGAAAAACAGAAGTCATGCACTCAGATCCAGCTTCTTCACATAGGACTGTCACTGAGCCCAGAATCATTGTGCAAACAACAAGTGAAGTTGATCTCTTAGATGATGGGTATAGATGGCGAAAATATGGGCAGAAAGTTGTCAAAGGCAACCCATATCCTAGGAGCTATTACAAATGTACAACCCCGGGTTGTAATGTGAGAAAGCATGTGGAAAGGGCTTCAACAGATCCTAAAGCTGTCATAACAACATATGAAGGAAAACACAATCATGATGTGCCAGCAGCCAAGACTAACAGCCACACTATGGCCAGCAATACTGCATCACAGTTAAAATCACAGAATTCCAATCCTGAGAAGCATAGTTTTGGCAGCAGAGATACCGGTGGCAACGAACAACAGCCGGTGGCGCGTCTACGGCTGAAGGAAGAGCAGATAACCTAG | 1383 | 0.5054 | MAGAGNGGLPPWKEAPPPPRPTISLPPRPASMDTLFTGGFSPGPMTLLSNFLADGDDCKSFSQLLAGAMTSPVTGAAVLDSPAGLFSPNQVSFGMTHQQALAQVSVQAAHTNSNIHIQPQHSLPLSVSQVPAAAASNTTQHLIPPLSADSWAAMAESADHSHAEQRSQSSSMNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLEGHVTAIIYKGEHNHQRPQPNKRSKDTIMASNENENVQGNVDSSHQGASTNSMMKMDPESSQATADRLSGTSDSEEVGDHETEVDEKNVELDPKRRKTEVMHSDPASSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTMASNTASQLKSQNSNPEKHSFGSRDTGGNEQQPVARLRLKEEQIT | 460 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca06g00599 | 460 | Pfam | WRKY DNA -binding domain | 179 | 235 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca06g00599 | 460 | Pfam | WRKY DNA -binding domain | 348 | 404 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca06g00599 | 460 | PANTHER | WRKY TRANSCRIPTION FACTOR 58-RELATED | 74 | 459 | - | - | |
Cca06g00599 | 460 | PANTHER | WRKY TRANSCRIPTION FACTOR 58-RELATED | 15 | 74 | - | - | |
Cca06g00599 | 460 | MobiDBLite | consensus disorder prediction | 291 | 323 | - | - | |
Cca06g00599 | 460 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 74 | 459 | IPR044810 | GO:0003700 | |
Cca06g00599 | 460 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 15 | 74 | IPR044810 | GO:0003700 | |
Cca06g00599 | 460 | MobiDBLite | consensus disorder prediction | 252 | 331 | - | - | |
Cca06g00599 | 460 | SUPERFAMILY | WRKY DNA-binding domain | 176 | 237 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cca06g00599 | 460 | ProSiteProfiles | WRKY domain profile. | 179 | 237 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca06g00599 | 460 | MobiDBLite | consensus disorder prediction | 409 | 445 | - | - | |
Cca06g00599 | 460 | SMART | WRKY_cls | 178 | 236 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca06g00599 | 460 | SMART | WRKY_cls | 347 | 406 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca06g00599 | 460 | SUPERFAMILY | WRKY DNA-binding domain | 339 | 407 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cca06g00599 | 460 | MobiDBLite | consensus disorder prediction | 11 | 26 | - | - | |
Cca06g00599 | 460 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Cca06g00599 | 460 | ProSiteProfiles | WRKY domain profile. | 342 | 407 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca06g00599 | 460 | MobiDBLite | consensus disorder prediction | 401 | 460 | - | - | |
Cca06g00599 | 460 | Gene3D | WRKY domain | 163 | 238 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cca06g00599 | 460 | Gene3D | WRKY domain | 332 | 408 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cca06g00599 | 460 | MobiDBLite | consensus disorder prediction | 252 | 290 | - | - | |
Cca06g00599 | 460 | MobiDBLite | consensus disorder prediction | 153 | 184 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca06g00599 | Cca-Chr6 | 17273051 | 17279320 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca06g00599 | 20 | 65 | WRKY Transcription Factor Family | AT2G03340 | 66.667 | 3.95e-12 | 66.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Cca06g00599 | WRKY | 1.1e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca06g00599 | - | - | gmx:100127369 | 752.666 |