Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00559 atGGTTCCTCTGATGTGTTTTGTGCTATTTTTGGCCCTGGCTGGCCACTCAAGTGCTCTTTACTGTGTATGCAAAGATGGTGTGGGTGATCAAGCTTTGCAGAAAGCAATAGATTATGCATGTGGTGCTGGAGCTGATTGTACCCCTATTCTACAGAATGGAGTCTGTTACCAACCTAACACAGTGAAGGATCACTGCAACTATGCTGTTAATAGCTATTTCCAGAAAAAGGGTCAAATTCAGGGAAGTTGTGATTTTTCTGGTGCTGCTACCCCCAGTCAAACTCCACCTACTTCAGCTTCCACATGTGTTTACCCCTCAAGTCCAAGCAATTCAGGaacaggaaccacaacaaccccaacaaccactacaccatcaGGCACACCATCCACCTTGACTCCAACCACTCCCACTACTGGTATAACTCcaggcactggcactggcactggcacaggcacaaccacaggcacCACCACTGGTAGTCCTAATATGTTTGGAATGAGTCCAACATCTTCAACTGGAACAGGCTTCAATGACTCTAGCAAAGGGGTGGTTCACTTGAGAGACTCTTGCATGTTCCTAATGTCCCTTGTTCTCACCTTCTGGCTAGTGTCAAGGGTCTAA 624 0.3958 MVPLMCFVLFLALAGHSSALYCVCKDGVGDQALQKAIDYACGAGADCTPILQNGVCYQPNTVKDHCNYAVNSYFQKKGQIQGSCDFSGAATPSQTPPTSASTCVYPSSPSNSGTGTTTTPTTTTPSGTPSTLTPTTPTTGITPGTGTGTGTGTTTGTTTGSPNMFGMSPTSSTGTGFNDSSKGVVHLRDSCMFLMSLVLTFWLVSRV 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00559 207 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 4 1 197 - -
Cca06g00559 207 Pfam X8 domain 21 91 IPR012946 -
Cca06g00559 207 SMART X8_cls 20 105 IPR012946 -
Cca06g00559 207 PANTHER BETA-1,3 GLUCANASE 1 197 IPR044788 -
Cca06g00559 207 MobiDBLite consensus disorder prediction 97 177 - -
Cca06g00559 207 Gene3D - 15 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00559 Cca-Chr6 16631108 16633488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00559 21 123 Miscellaneous Gene Families AT2G16230 42.718 6.52e-21 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00559 - - gmx:100789955 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00559 06 16631108 16633488 Cca06g00559 06 16631108 16633488 ECH