Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00554 ATGAACTATGATGCAATTGCTATGGATGAAACACAGGACCAGTATTATTCTTCCAGTCTACCTGAGTCTTCCTTATCTCATGACAGTGGCGGGAGGTCTTATTTCAATGGGCAAATGAATCGAGGTACTGGTATATCAGGCCTAAAGAAGAGAGGTCATGGAAGTCGGTCTTGGATTAAAATCGGTCAGGATGGGAATTCTCAGACTGTGACCCTTGACAAGGCAACTATTATGAGACATTGTTCTTTGCCTTCTAGAGATCTCCGGCTATTGGATCCAATGTTCATTTATCCTTCTACAATATTAGGACGAGAGAAGGCTATTGTAGTCAACCTTGAGCAAATCCGGTGTGTAATCACTGCTGATGAGGTCATCTTGATGAATTCATTGGATGGTAGTGTCGGTCAGTACAGGTTAGAATTATGCAATCGGCTTCAGAATGAAAAAGCTGATGATCTACCTTTTGAATTTAGGGCACTGGAGTTGGCTCTAGAATTGACGTGCACATCTTTGGATGCTCAGGTAAAAGAACTGGAAATGGAGATATATCCTGTGCTAGATGAATTGGCCTCATCTATCAGTACTCTCAATCTGGAACGTGTTCGAAGATTTAAAGGTCACCTACTTGCTTTGACTCAACGAGTTCAGAAGGTTCGTGATGAGATAGAACATCTCATGGATGATGATGGTGACATGGCTGAAATGTGCCTAACTGAGAAAAGGAGAAGATCGGACACTTACACTTTTAGTGATTGTTTTCAAACTCATGCATCAGGTAGAGTGATTTCAAGATCAGCTCCTTCTTCACCAGAGCGAACAATTAGTGGAGTCCAGATGTTGCAAAGGGCTTTTAGCAGCATTGCAAATTCCAGTAAACATGGTAGTTCAATGGGTTCATCTGATAATGGGGAAAGGATTGAGCCTCTTGAAATGTTGCTTGAAGCATACTTTGTCGTCATTGATAATACTCTTAACACACTATTGTCGGTATGA 993 0.4139 MNYDAIAMDETQDQYYSSSLPESSLSHDSGGRSYFNGQMNRGTGISGLKKRGHGSRSWIKIGQDGNSQTVTLDKATIMRHCSLPSRDLRLLDPMFIYPSTILGREKAIVVNLEQIRCVITADEVILMNSLDGSVGQYRLELCNRLQNEKADDLPFEFRALELALELTCTSLDAQVKELEMEIYPVLDELASSISTLNLERVRRFKGHLLALTQRVQKVRDEIEHLMDDDGDMAEMCLTEKRRRSDTYTFSDCFQTHASGRVISRSAPSSPERTISGVQMLQRAFSSIANSSKHGSSMGSSDNGERIEPLEMLLEAYFVVIDNTLNTLLSV 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00554 330 Gene3D Magnesium transport protein CorA, transmembrane region 133 330 - -
Cca06g00554 330 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 9 329 IPR039204 -
Cca06g00554 330 Coils Coil 208 228 - -
Cca06g00554 330 PANTHER MAGNESIUM TRANSPORTER MRS2-5 9 329 - -
Cca06g00554 330 CDD Mrs2_Mfm1p-like 58 327 IPR039204 -
Cca06g00554 330 Gene3D - 46 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00554 Cca-Chr6 16522970 16530424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00554 8 330 MRS2 Gene Family AT2G03620 62.651 3.88e-128 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00554 K16075 - gmx:100803935 580.867