Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00538 ATGACCCAATCCAACAACGAAAACGGATTTGGGGGAGTCTGGAAGAAGCATAAATTCTTGAAGCTTCTTCTTGTGTGTCACCTTCTCTTAATTTTTTTTTTCTTTAGCAATTGGACTCATTCAAACCATGGCTCTCTCGGGACTGATTTGGCAGACTATGTTGCTGAGTTATCAGAGGCTTCTGTGAAAGAACGAGGAGTCTTTGCCATTGCTTTATCTGGTGGTTCTCTCATTGGCTTAATGGGAAAACTTTGCGAAGCTCCTTATAACAAGACTGTGGACTGGGCCAAGTGGTATATCTTCTGGGCTGATGAACGTGTTGTGGCAAAAAGTCATGCTGATAGCAATTATAAGCTTGCCAAAGATGGCCTTTTGTCCAAGGTGCCTATTGTCCCTAGTCATGTGCATTCTATTAATGATTCGGTGTCAGCAGAAGAAGCTGCCGATGATTATGAATTCGCCATTCGACAGTTAGTGAAAACCCGTGTCGTCAGTGTGTCTGAGATCAGCGACTGTCCAAAGTTTGATCTCATTCTGCTCGGATTGGGTCCGGACGGCCATGTTGCCTCTTTATTTCCTAACCACCCAGCACTCAATGAAAGGGAAGAATGGATAACTTTCATTACTGACTCCCCCAAACCCCCTCCTGAGAGAATCACATTCACCTTGCCTGTTATCAATTCTGCATCCAATGTTGCAGTAGTTGTCACAGGGGAAAGCAAAGCAGAATCTGTACACTTGGCAATAGATGACATTGGAGCCGACTGCCCGTTAATACCGGCAAGAATGGTCCAACCCGCCATGGGGAAGTTGGTGTGGTTTTTGGATAAGTTGGCTGCCTCAAAACTTGAAGATTCCAATTTGAACAAGTAG 873 0.4467 MTQSNNENGFGGVWKKHKFLKLLLVCHLLLIFFFFSNWTHSNHGSLGTDLADYVAELSEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWAKWYIFWADERVVAKSHADSNYKLAKDGLLSKVPIVPSHVHSINDSVSAEEAADDYEFAIRQLVKTRVVSVSEISDCPKFDLILLGLGPDGHVASLFPNHPALNEREEWITFITDSPKPPPERITFTLPVINSASNVAVVVTGESKAESVHLAIDDIGADCPLIPARMVQPAMGKLVWFLDKLAASKLEDSNLNK 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00538 290 Gene3D - 38 285 - -
Cca06g00538 290 PANTHER 6-PHOSPHOGLUCONOLACTONASE 45 286 IPR039104 -
Cca06g00538 290 PANTHER 6-PHOSPHOGLUCONOLACTONASE-RELATED 45 286 - -
Cca06g00538 290 SUPERFAMILY NagB/RpiA/CoA transferase-like 40 284 IPR037171 -
Cca06g00538 290 TIGRFAM pgl: 6-phosphogluconolactonase 41 283 IPR005900 GO:0005975|GO:0006098|GO:0017057
Cca06g00538 290 CDD 6PGL 46 275 IPR005900 GO:0005975|GO:0006098|GO:0017057
Cca06g00538 290 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 45 273 IPR006148 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00538 Cca-Chr6 16125183 16132409 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00538 K01057 - gmx:100809411 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00538 06 16125183 16132409 Cca06g00538 06 16125183 16132409 ECH