Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00530 ATGTTGACAGTGTTGTGTTATGTCGTGGCTTTGACGTTATGTGCATTCTTTGCAGTGCTGAAATGGAACAACATGAGGTACTCAAAGAAAGGAATGCCTCCTGGATCATTGGGTTTCCCTTTTGTTGGTGAGACTCTCAAATTTCTTAAACAAGGTCCAGATTTCATGAAAGGACGCAGATCAAGATATGGAAATCTTTTCAAAACTCACGCATTAGGGTCCCCTATGGTTGTTAGCTTAGATCCTGATGTCAATAGATACATACTCGTGAATGAAGCAAAAGGCCTAGTTCCTGGCTACCCCAACTCCATGAGGGAGATACTAGGCACTAACATTGCTGAGGTTCATGGTGCCACGCATAAACGAATTAGAGGCTCACTATTATCTGTCATTGGTCCAATTGCAGTTAAGGATCGTATTTTGCCAAAAGTTGATGACTTCATGAGGTCTTACCTTCACAGTTGGGATGGTAAAACAATTGATCTGCAAGAAAAAACTGTAGAGATGGCATTCTTTATTTCCATGAAAGCGGTTGTAGAAAATGAGCCAACCTCTTTCCTCAAGTCCTTTAAAGCTACATTTGATAACATGGCATTAGGAACAATATCTTTGCCAATTAAAATTCCTGGAACGGATTACTTTCGAGCACTTAAGGCTAGGGAAAAAGTGGTTCCAATACTAAGAGAGCTCTTAGCCAAGAGAAGAGCTTCTTCGACTACTCATGATGACATTCTTGATCATTTTTTGAAAAATGAGGATGGAGGACACAAACTTGATGATGATGAAATAATTGAACAAATAATCACAATCTTGTATTCAGGTTATGAAACGGTATCAACTACTACAATGATGTCTATCAAATACCTATATGATAACCCAAGTGTTCTTGAGGCAGTAAGGGAAGAGCATTTTGCAATCCAGCAAAAGAAAATGCCTACGGAACGAATCAACTGGGATGACTACAAGAATATGAGGCTAACTCGTGCGGTGATACTTGAAACCATGAGATTAGCTAATGTTGTTGCTGGAGTGATGAGGAGGACCACTAGTGATATAGAATTGAATGGCTTTATCATTCCTAAGGGATGGAGAATTTATGTCTACACAAGGGAGACTAATTTTGATCCCATCCTTTATCAAGAACCTTTTACTTTTAATCCATGGAGATGGCTGGAGAAAGGCTTGGAGTCTCATAATCATAACATGCTATTTGGAGCAGGAGGCAGGGTGTGTCCTGGAAAAGAATGGGGCATACTTAAAATCAGTTTTTTCCTTCACTACTTTGTGACTAGATACAGGTGGGAGGAAGCAAAGACAAACAAAAAGCTTTTGAAATTCCCGAGAGTGCTAGCACCGGAAGGACTACACGTAAGGATCACAAAGTACTAG 1389 0.3988 MLTVLCYVVALTLCAFFAVLKWNNMRYSKKGMPPGSLGFPFVGETLKFLKQGPDFMKGRRSRYGNLFKTHALGSPMVVSLDPDVNRYILVNEAKGLVPGYPNSMREILGTNIAEVHGATHKRIRGSLLSVIGPIAVKDRILPKVDDFMRSYLHSWDGKTIDLQEKTVEMAFFISMKAVVENEPTSFLKSFKATFDNMALGTISLPIKIPGTDYFRALKAREKVVPILRELLAKRRASSTTHDDILDHFLKNEDGGHKLDDDEIIEQIITILYSGYETVSTTTMMSIKYLYDNPSVLEAVREEHFAIQQKKMPTERINWDDYKNMRLTRAVILETMRLANVVAGVMRRTTSDIELNGFIIPKGWRIYVYTRETNFDPILYQEPFTFNPWRWLEKGLESHNHNMLFGAGGRVCPGKEWGILKISFFLHYFVTRYRWEEAKTNKKLLKFPRVLAPEGLHVRITKY 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00530 462 PRINTS P450 superfamily signature 273 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00530 462 PRINTS P450 superfamily signature 329 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00530 462 PRINTS P450 superfamily signature 402 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00530 462 Gene3D Cytochrome P450 22 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00530 462 Pfam Cytochrome P450 33 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00530 462 PRINTS E-class P450 group IV signature 32 49 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00530 462 PRINTS E-class P450 group IV signature 54 77 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00530 462 PRINTS E-class P450 group IV signature 264 290 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00530 462 PRINTS E-class P450 group IV signature 324 340 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00530 462 PRINTS E-class P450 group IV signature 373 391 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00530 462 PRINTS E-class P450 group IV signature 411 429 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00530 462 SUPERFAMILY Cytochrome P450 25 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00530 462 PANTHER CYTOCHROME P450 85A-LIKE 8 459 - -
Cca06g00530 462 PANTHER CYTOCHROME P450 26 8 459 - -
Cca06g00530 462 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 404 413 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00530 Cca-Chr6 16007996 16015121 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00530 80 462 Cytochrome P450 AT5G38970 54.286 1.11e-154 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00530 K09590 - gmx:100818004 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00530 06 16007996 16015121 Cca06g00530 06 16007996 16015121 ECH