Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00529 ATGTTGACAGTGTTGTATTATGCAGTGGCTTTGACGATAAGTGCATTCTTGGTAGTGCTGAAATGGAACAACATGAAGTACTCAAAGAAAGGAATGCCTCCTGGATCATTGGGTTTGCCTTTCATTGGTGAGACTCTCAAATTTCTCAAACATGGTCCAGATTTCATGAAAGGTCGCAAATCAAGATATGGAAATCTTTTCAAAACTCACGCATTAGGGTCTCCTATTGTTGTTAGCATGGATCCTGATGCCAATAGATACATACTCGTGAATGAAGCAAAAGGCCTAGTTCCTGGCTACCCCGACTCCATGAGGAACATTCTAGGGACTAACATTGCTGAGGTTCATGGTGCTACACATAAACGAATTAGAGGCTCACTATTATCTCTCATTGGTCCAACTTCAGTTAAGGATCGACTTGTGCCAGAAGTTGATGAGTTCATGAGGTCTTACCTTGACAATTGGGATGGTAAAATAATTGATCTTCAAGAAAAAACTGTTGAGATGTCATTCTTTATTTCCTTGAAAGCGGTTGTAGAAAATGAGCCAAACTCTTTCCTTGAGTCCTTTAAAGCCACATTTGATAAGATGGCAATAGCAACAATATCCTTGCCAATTAAATTCCCAGGAACCAATTATTATCGGGGACTAAAGGCTAGGGAAAAAGCGATTCCAATGCTAAAAGAGCTCTTAGCCAAGAGAAGAGCTTCTTCGGCTACTCATGGTGACATTCTTGATCAACTTATGAGAACTGAGAATGGTGGACACAAACTAGATGATGATGAAATAATTGAGCAAATCATCACAATCTTGTATTCAGGTTATGAAACGGTATCAACTACTACTATGATGGCTATCAAATACCTACATGATAACCCAAGCATTCTTCAGGAAATAAGGGAAGAGCATTTTGCAATCAAACAAAAGAAAATGCCCGAGGAACAGATCACTTGGGATGACTACAAGAATATGAGGCTAACTCGTGCGGTAATACTTGAAACCATGAGATTGGCAAGTGTTGTTGCTGGAGTGATGAGGAGGACCACTAATGATATAGAATTGAATGGGTTTAACATTCCCAAGGGATGGAGAGTTTATGTATACACAAGGGAGACTAACTTTGATCCTGTACTCTATCAAGAACCTTTTACTTTTAATCCATGGAGATGGCTGCAGGAGAAAGGGTTGGAGTCTCATAATCACAACATGCTATTTGGAGCAGGAGGTAGGGTGTGTCCTGGAAAGGAATGGGGCATGCTTAAAGTCAGTCTTTTCATTCACTACTTTGTGACTAGATACAGGTGGGAGGAAGCAAAGGGAAACAAAAAGCTAGCAAAATTTCCGAGAGTGTTGGCACCAGATGGATTAAACATAAAGATCACAAAGTACTAG 1392 0.4009 MLTVLYYAVALTISAFLVVLKWNNMKYSKKGMPPGSLGLPFIGETLKFLKHGPDFMKGRKSRYGNLFKTHALGSPIVVSMDPDANRYILVNEAKGLVPGYPDSMRNILGTNIAEVHGATHKRIRGSLLSLIGPTSVKDRLVPEVDEFMRSYLDNWDGKIIDLQEKTVEMSFFISLKAVVENEPNSFLESFKATFDKMAIATISLPIKFPGTNYYRGLKAREKAIPMLKELLAKRRASSATHGDILDQLMRTENGGHKLDDDEIIEQIITILYSGYETVSTTTMMAIKYLHDNPSILQEIREEHFAIKQKKMPEEQITWDDYKNMRLTRAVILETMRLASVVAGVMRRTTNDIELNGFNIPKGWRVYVYTRETNFDPVLYQEPFTFNPWRWLQEKGLESHNHNMLFGAGGRVCPGKEWGMLKVSLFIHYFVTRYRWEEAKGNKKLAKFPRVLAPDGLNIKITKY 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00529 463 Pfam Cytochrome P450 33 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00529 463 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506|GO:0016705
Cca06g00529 463 PRINTS P450 superfamily signature 273 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00529 463 PRINTS P450 superfamily signature 329 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00529 463 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00529 463 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00529 463 PANTHER CYTOCHROME P450 85A-LIKE 8 460 - -
Cca06g00529 463 PRINTS E-class P450 group IV signature 32 49 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00529 463 PRINTS E-class P450 group IV signature 54 77 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00529 463 PRINTS E-class P450 group IV signature 264 290 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00529 463 PRINTS E-class P450 group IV signature 324 340 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00529 463 PRINTS E-class P450 group IV signature 357 371 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00529 463 PRINTS E-class P450 group IV signature 373 391 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00529 463 PRINTS E-class P450 group IV signature 396 412 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00529 463 PRINTS E-class P450 group IV signature 412 430 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00529 463 Gene3D Cytochrome P450 22 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00529 463 PANTHER CYTOCHROME P450 26 8 460 - -
Cca06g00529 463 SUPERFAMILY Cytochrome P450 26 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00529 Cca-Chr6 15985401 15992475 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00529 80 463 Cytochrome P450 AT5G38970 54.663 7.70e-157 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00529 K09590 - gmx:100818004 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00529 06 15985401 15992475 Cca06g00529 06 15985401 15992475 ECH