Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00527 ATGTTGATTGTGTTGTATTATGTCGTGGCTTTGACGTTAGGTGCATTCTTTGGAGTGCTGAAATGGAACAGAATAAGGTACTCAAAGAAAGGAATGCCTCCTGGATCATTGGGTTTGCCTTTCATTGGCGAGACTCTCAACTTTCTCAAATACGGTCCAGATTTCATGAAAGGACGCAAATCAAGATATGGAAATCTTTTCAAAACTCACGCATTAGGCTCGCCTATGGTTGTTAGCATGGATCCTAATGTGGGAGGAAGCAAAGGGAAACAAAAAGCTTGCAAAATTCCCGAGAGTGTTGGCACCAGATGGATTACGCATAAAGATCACAAACGAAACCCAAACGACAAAATCGGAATCTACTCCGACCGTCTGAACGCCTACGTGACCTACCGGAAACAGCAGGTGACGTACCGCACCCCCATCCCTCCCTCCTACCAGGGTCACAAGGAAGAGGACGTGTGGTCCCCCTTCGTCTACGGCACCAACGTCCCCGCCTACAACTTACTCGGCCTCAGCCAGGACCAGACCAACGGCAACGTCCCCGTCGTTGTTAAGATTGACGGCAAGGTACGATGGAAGTGGGGTGTGGATCTGAAGTCTACTAAGAACAACACATTTGATGCTATTATACAAGAACCTGTCAAACAAGCTATGATAACAACCTCCGCAACTCAATCTTCTCTAGATGACACAtggtacccagatacagggctctcggaagcttctgctacaagggaagcttaa 747 0.4404 MLIVLYYVVALTLGAFFGVLKWNRIRYSKKGMPPGSLGLPFIGETLNFLKYGPDFMKGRKSRYGNLFKTHALGSPMVVSMDPNVGGSKGKQKACKIPESVGTRWITHKDHKRNPNDKIGIYSDRLNAYVTYRKQQVTYRTPIPPSYQGHKEEDVWSPFVYGTNVPAYNLLGLSQDQTNGNVPVVVKIDGKVRWKWGVDLKSTKNNTFDAIIQEPVKQAMITTSATQSSLDDTWYPDTGLSEASATREA 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00527 248 SUPERFAMILY Cytochrome P450 25 83 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00527 248 Pfam Late embryogenesis abundant protein 112 195 IPR004864 -
Cca06g00527 248 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 111 197 - -
Cca06g00527 248 PANTHER OS05G0367900 PROTEIN 111 197 IPR044839 GO:0098542
Cca06g00527 248 Gene3D Cytochrome P450 23 114 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00527 Cca-Chr6 15953706 15962544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00527 32 92 Cytochrome P450 AT1G78490 48.485 1.05e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00527 - - gmx:100500476 157.147