Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00525 ATGGCGACCCCGTCTTCTTCTGTGAAGCCCCTTCCTGTGCTGAAGGATGAGCTTGACATCGTGATCCCCACCATCCGCAACCTCGACTTCCTCGAGATGTGGCGTCCCTTCTTTGAGCCCTACCACCTCATCATCGTGCAAGACGGTGACCCCAACAAAACCATCAAGGTTCCTGAGGGCTTTGATTATGAGCTCTACAACCGCAACGATATCAACAGGATCTTGGGTCCTAAAGCCTCCTGCATCTCCTTCAAGGACTCTGCTTGTCGCTGCTTTGGGTACATGGTGTCCAAGAAGAAGTACATCTACACCATCGATGATGACTGCTTCGTTGCTAAAGACCCCTCTGGAAAGGATATCAATGCTCTTGAGCAGCACATTAAGAATCTCCTATGTCCATCCACTCCATTTTTCTTCAATACCCTCTATGACCCTTACAGAGAAGGTGCTGATTTCGTCCGTGGATACCCTTTCAGTCTTCGTGAGGGTGCCCCCACTGCTGTTTCTCATGGCTTGTGGCTCAACATACCTGATTATGATGCTCCTACACAGCTTGTTAAACCCCTTGAGAGGAACTCCAGGTATGTTGATGCTGTTCTCACCATTCCTAAAGGAACATTGTTCCCTATGTGTGGCATGAATCTGGCCTTCGACCGTGAGCTCATTGGACCTGCCATGTACTTTGGACTCATGGGTGATGGTCAACCTATTGGACGATACGATGATATGTGGGCTGGATGGTGTGTTAAGGTTATCTGTGACCACTTAGGTTTGGGAGTGAAAACTGGGTTACCATACATATGGCACAGCAAAGCAAGCAACCCATTTGTGAATCTGAAAAAAGAGTACAAGGGCATCTTCTGGCAAGAAGAGATCATTCCATTTTTCCAAAGTGCCACCCTTCCAAAAGAGTGCACCTCTGTCCAAAAGTGCTACATTGAACTCTCCAAGCAAGTCAAAGAGAAGCTTGGGGCCGTTGACCCCTACTTCAACAAGCTTGCAGATGCCATGGTCACTTGGATTGAAGCTTGGGATGAACTTAACAATACTTCTGCACCAAATTCTTCAGAACAAGCTAATGGGGTTGCTGCCAAGTGA 1098 0.4772 MATPSSSVKPLPVLKDELDIVIPTIRNLDFLEMWRPFFEPYHLIIVQDGDPNKTIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPFFFNTLYDPYREGADFVRGYPFSLREGAPTAVSHGLWLNIPDYDAPTQLVKPLERNSRYVDAVLTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQSATLPKECTSVQKCYIELSKQVKEKLGAVDPYFNKLADAMVTWIEAWDELNNTSAPNSSEQANGVAAK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00525 365 PANTHER UDP-ARABINOSE MUTASE 1 360 IPR037595 -
Cca06g00525 365 PIRSF UPTG 8 352 IPR004901 GO:0016866|GO:0071669
Cca06g00525 365 Pfam Reversibly glycosylated polypeptide 14 348 IPR037595 -
Cca06g00525 365 SUPERFAMILY Nucleotide-diphospho-sugar transferases 38 247 IPR029044 -
Cca06g00525 365 PANTHER UDP-ARABINOPYRANOSE MUTASE 3 1 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00525 Cca-Chr6 15910057 15913927 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00525 K13379 - gmx:100809983 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00525 06 15910057 15913927 Cca06g00525 06 15910057 15913927 ECH
Cca06g00525 06 15910057 15913927 Cca09g00329 09 7717171 7720455 ECH