Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00518 ATGGGAAAGAGAGGAACAAGGTTACCAGGCTTTTGCCTCAACAGAATTAGGCCTCATGCTAGGGTGCGTTCACCACCCGCACAAGCCAAGCATGACAACACAACAAGTGCCACTAAACTTGATCAGAAAACTGAGAATTCTTGCAATGCATGTGAGGAGAAATCTGATGATGTGGCAAAACCCGGGTCTGTGATTGGTAGGAAGATCATGATTGTGGTTGATTCTAGCCTTGAGGCCAAAGGTGCTGTGCAATGGGCACTCACTCACACAGTTCAGAACCAAGACACTATAGTTCTTCTTCATGTCATGAAGCCTTCTAATAAGCAAGCCACTGATGATGAGTCCAGCAAGGAGATAGCTCCAAGGGCTTATGAACTTGCTTCCTCCTTCAAGAACATGTGTCATGTGAAGAGGCCTGAGGTACAAATTGAGATTGCAGTAACAGAGGGAAAGGATAAGGGGCCAAAGATAGTGGAGGAGGCCAAAAAGCAAGGGGTGGCACTTCTTGTTTTGGGGCAGAAGAAGAGGTCCACAACATGGCGTCTTCTGATGATGTGGGCAGGGCACAGAGTCACTGGTGGGGTGGTAGAGTACTGCATTCAGAATGCACATTGCATGGCAATTGCAGTGAGAAGAAAAAGCAAGAAGAGTGGAGGCTACATGATTACTACTAAGCGTCACAAAGATTTCTGGCTCTTAGCTTAA 705 0.4667 MGKRGTRLPGFCLNRIRPHARVRSPPAQAKHDNTTSATKLDQKTENSCNACEEKSDDVAKPGSVIGRKIMIVVDSSLEAKGAVQWALTHTVQNQDTIVLLHVMKPSNKQATDDESSKEIAPRAYELASSFKNMCHVKRPEVQIEIAVTEGKDKGPKIVEEAKKQGVALLVLGQKKRSTTWRLLMMWAGHRVTGGVVEYCIQNAHCMAIAVRRKSKKSGGYMITTKRHKDFWLLA 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00518 234 Pfam Universal stress protein family 67 211 IPR006016 -
Cca06g00518 234 MobiDBLite consensus disorder prediction 23 47 - -
Cca06g00518 234 CDD USP_Like 68 210 - -
Cca06g00518 234 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 67 215 - -
Cca06g00518 234 Gene3D HUPs 66 220 IPR014729 -
Cca06g00518 234 MobiDBLite consensus disorder prediction 28 45 - -
Cca06g00518 234 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00518 Cca-Chr6 15622869 15624524 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00518 - - gmx:100527708 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00518 06 15622869 15624524 Cca06g00518 06 15622869 15624524 ECH