Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00510 ATGCTTGTAATCCTAACTTACCAAAAACTCTTTAGTCATTCTAGACACTACAAATGCGTTCCATTCTACACGCTCAAGCTcgtctccacctcacgcgcctgcaaccaccttcccttcgccactcacaccttctccgtcaatgcctccgcctccgccctcctctgccgccAGTCCCGCCAAACCAACCCCGACGACCGCACCGCCCTCCGCCACGTCGTCTTCGGCATCGCCGCCTCCGCCAAGCTCTGGAACCAGCGCAAGAACTACATCAAACTCTGGTACAGACCTAGGGAGATGCGCGGCGTCGTCTGGCTCGACCAGAACATGACGCCGGAGCCCGACGAGGACTCTCTCCGCCGAACATTTTCTTTTCTCGTTCCACATAACATCTATTTGAAGTACCAACTCAATGAGATAGAAGACAATGCTTCAATTAATGATGGGAAAGAGGTCATTAAAGGCAGCATCTTGAATCAAATCACCAATGCCACACAAATGATAAAGCTGGAAAAAGATCCACATGCAGCGTTTGCACTAATTATTGATGGGAAAACTCTAACATATGCCTTAGAAGATGATGTCAAGCACCAATTTTTGGGATTGGCTGTTTTGATTGTGCATCTGTTATTTGCTGTCGTGTGTCTCCAAAGCAAAAAGCATTGGTTAGTGAAGGAAGGAACTGGGAAGACCACTTTAGCCATAGGTGATGGTGCAAATGATGTTGGCATGATTCAAGAAGCTGACATTGGTGTTGGAATCAGTGGGGTTGAAGATTTCTTGTCAAGCCTTTTTGGTAACTTCATAGTTGTCAGAGCTGACCAAGGGCGAAGCTTCTTGCTTTGCATGGAACTTATCTAG 858 0.4103 MLVILTYQKLFSHSRHYKCVPFYTLKLVSTSRACNHLPFATHTFSVNASASALLCRQSRQTNPDDRTALRHVVFGIAASAKLWNQRKNYIKLWYRPREMRGVVWLDQNMTPEPDEDSLRRTFSFLVPHNIYLKYQLNEIEDNASINDGKEVIKGSILNQITNATQMIKLEKDPHAAFALIIDGKTLTYALEDDVKHQFLGLAVLIVHLLFAVVCLQSKKHWLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEDFLSSLFGNFIVVRADQGRSFLLCMELI 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00510 285 Gene3D - 115 272 IPR023214 -
Cca06g00510 285 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 147 268 - -
Cca06g00510 285 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 147 268 - -
Cca06g00510 285 SUPERFAMILY HAD-like 179 254 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00510 Cca-Chr6 15454527 15457611 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00510 146 271 Primary Pumps ATPases AT1G72700 65.625 6.15e-45 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00510 K01530 - gmx:100778710 176.792