Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00479 ATGGCATCGGTTTCATTCAAGCGTAACGTTTTTGTTGTAACCGTGGTGATCCTCGTACTAGCGTCGACAACCTCGGCGGAAGAATGCGAGTCGAAATACGGTGGAAAGTGCCACGACAAGGCGAAGGCGCTGAAGCTAAAACTGGTGGCGATATCGAGCATATTGGTGACGAGCATGGTTGGGGTTTGTCTCCCCGTGTTCTCCCGTGCGGTTCCTGCGCTGCAACCGGACCGAGACCTCTTCGTCCTCGTTAAGGCCTTTGCCTCCGGTGTCATACTTGCCACCGGTTACATGCACGTCATGCCCGATTCCTTCCAAGATCTTACCTCCCAGTGCTTGCCCCAACGCCCCTGGCAGAACTTTCCCTTCACCACTTTCATCGCCATGCTCTCTGCGGTTCTCACTCTCATGATCGACTCCTTCTCCATTAGTTACTTCAAGAAGAACCTACCTCTTGCGCCTTCCCTCCACGCCGCCGAGACAAAGGAAGCCCACATGTTCgcccatgcccatgcccatgcccatgcccatgcccatgcccatgGATTTGGACACCATGATGATGGTGCCGCCGTCAATGCGGAACAGTTGCTGCGCTACCGTGTGGTGGCTCAGGTGTTGGAGCTAGGGATTGTGGTGCACTCTGTGGTCATTGGTTTGTCAATGGGAGCTTCGGATAACCCATGCACCATTCGGCCTCTCATTGCTGCGCTTTGCTTCCATCAAATGTTTGAGGGGATGGGCTTAGGTGGTTGCATACTTCAGGCTGAGTATGGAATGAAGGTGAAGGCCATTATGATATTCTTCTTCTCGGTGACGACGCCGTTTGGGATCGCGTTGGGGATTGGAGTGTCGAAAGTGTACAGTGACACGAGTCCAACGGCGCTTATTGTGGAAGGGGTTCTGAATGCAGTGTCTGCGGGGCTTCTGAACTACATGGCGCTTGTTGAGTTATTGGCTTCTGATTTTATGGGACCAAAGTTGCAGAGCAGAATGAAGCTCCAGGTTTTTGCCTACATCGCAGTTTTGCTAGGCGCAGGGGGCATGTCGGTGATGGCAATATGGGCATAG 1071 0.507 MASVSFKRNVFVVTVVILVLASTTSAEECESKYGGKCHDKAKALKLKLVAISSILVTSMVGVCLPVFSRAVPALQPDRDLFVLVKAFASGVILATGYMHVMPDSFQDLTSQCLPQRPWQNFPFTTFIAMLSAVLTLMIDSFSISYFKKNLPLAPSLHAAETKEAHMFAHAHAHAHAHAHAHGFGHHDDGAAVNAEQLLRYRVVAQVLELGIVVHSVVIGLSMGASDNPCTIRPLIAALCFHQMFEGMGLGGCILQAEYGMKVKAIMIFFFSVTTPFGIALGIGVSKVYSDTSPTALIVEGVLNAVSAGLLNYMALVELLASDFMGPKLQSRMKLQVFAYIAVLLGAGGMSVMAIWA 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00479 356 Pfam ZIP Zinc transporter 45 353 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cca06g00479 356 PANTHER ZINC TRANSPORTER 7 20 356 - -
Cca06g00479 356 TIGRFAM zip: ZIP zinc/iron transport family 29 356 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cca06g00479 356 PANTHER ZINC/IRON TRANSPORTER 20 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00479 Cca-Chr6 14490182 14492346 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00479 21 356 Inorganic Solute Cotransporters AT1G31260 57.647 1.64e-139 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00479 K14709 - gmx:100784872 481.1