Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00474 ATGCTCTTACGTGGCAGTATGGCCGCCCCTCCCCGGCCGTCGCTCCGCCTGCCGggcgcgcgggtccagccgcggagcgtggcggtgtcggtggcgtcgtcttccggcggcggcgagcggTATCCGCTGTCGATCTCcgacgaggcgctggagtcgcgggggttcgcggtgcggcgcggcgcggaggggcTGGACCTGGAGGAGCTGAACGCGGTGTTCGTGGCGGTGGGGTTCCCGCGGCGGGAGCCGGAGAGGATCCGCGTGGCGCTGGAGCACACGGAGGCGGTGGTGTGGGTGGAGCAGCGGAAGACGCGGCGCGCGGTGGCGTTCGCGAGGGCCACCGGCGACGGCGTCTTCAACGCCATCATATGGGACGTCGTTGTGGACCCCTCCTTCCAGGGGATTGGCCTCGGCAAGGCCCTCATCGAGAGGCTGCTGAGGGAGCTTCTCAGTAAGGGAATTTCCAATATTGCCCTCTATTCGGAGCCTCGGGTTCTCGGGTTTTATCGCCCATTGGGCTTCGTTGCTGACCCCGATGGGATCCGGGGAATGGTGTACTCCAGAAAACAAAACAAAAAATAG 582 0.5017 MLLRGSMAAPPRPSLRLPGARVQPRSVAVSVASSSGGGERYPLSISDEALESRGFAVRRGAEGLDLEELNAVFVAVGFPRREPERIRVALEHTEAVVWVEQRKTRRAVAFARATGDGVFNAIIWDVVVDPSFQGIGLGKALIERLLRELLSKGISNIALYSEPRVLGFYRPLGFVADPDGIRGMVYSRKQNKK 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00474 193 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 55 192 IPR000182 GO:0016407
Cca06g00474 193 Gene3D - 59 188 - -
Cca06g00474 193 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 65 178 IPR016181 -
Cca06g00474 193 Pfam Acetyltransferase (GNAT) family 78 174 IPR000182 GO:0016407
Cca06g00474 193 PANTHER ACYL-COA N-ACYLTRANSFERASE 37 190 IPR045039 GO:0008080
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00474 Cca-Chr6 14344598 14345586 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Cca06g00474 Acetyltransf_1 1.5e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00474 K22450 - gmx:100778613 299.671