Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00468 ATGGAAGACGTGATGACAGAAGCAGCACCACCTTCAAGGTTCTTGGAAGAAGACCTAAACATCTTCACAACCCCTTCTCCACCTCTCCCCAAACCCTTCCTCATCTCCCAACCCCACACCCCTTCCCTCCTCATCGTCGCCCTCCCCGCCCCCTCCCTCGCCCTCTTCCGCCGCCTCCGGAGCTCCACCCCCGCCGCCTCCCTCCTCCTCCCGGAGCTCCCCCTCTCCCGCCCCAACCACACCGCCGATCTCTTCGCCCTCTCCCCCTCCGCCCTCCTCGCCGCCGTCCCCTTCCCCGTCCCCGCCCACCGCGCCCACGCCCTCGCCCGCGCCCTCCTCTCCGCCCGCATGGCGCCTCGCTCCGTCCTCCTCCTCGACTCCCTCCAACCTCCCAACTTCCGCGGGAGCCTCTCGTCCGACGAAACGCTGGCGTTTAAGCTCGAGACCTCCGCCGAAAGGAAGAGCGCCGACGCCGAGAAGATGCTCCCCGGGGTTCCGTATTACCCTTCCGGCAGCGTCGTCGATGGGCTCGGCGCCGCCATTCTCGCGCGCTGCCAGGTGCTCAACGTGAGGGCCAGTTTGTGCGTTTCGTGGCCTCGCTTCGACGCGTCGGTGGTGTCGTTGGTTAAGGGTTTGCTCCAGCGCGGTGTGTTGCGTGGCTTTGAGTTTGATTTGGGGGATGAGGATTTGAAATTCGGGAGGACAGTAACAATGGTTCCTTCTTTTCCTTCAAAATCCTTGATGCATGTTGTTCTCATCATTTGCTTTCTTGGTGCCACCAGATTGCATGCAAGTGACCCTCCTCTAACACTGGATTACTATGCATCAACTTGCCCCACTGTGTTTGATGTTGTTAGGAAGGAAATGGAATGTTCAGTGCTTTCTGATCCCCGAAATGCAGCCATGATAGTTAGGCTACACTTCCATGACTGCTTTGTTCAGGGATGCGATGGATCGGTTTTGCTTGATGATACAATCACACTTAAAGGAGAGAAGAAGGCAGCTACCAACACCCAATCTTTAAAAGGACTGGAAATTGTTGATAAAATCAAGAACATGATTGAATCAGAGTGCCCTGGTGTTGTTTCTTGCGCTGATATTCTCACTATTGCTGCCAGAGATGCTGTGATTCTGGTAGGTGGACCTTACTGGGATGTTCCTGTGGGAAGGAAGGACTCTGTCACTGCAAATTTTGATCTTGCTAACACCAATCTTCCCACTCCGGATGAGAGTCTTCTCTCTATCATAGCCAAGTTTCTTTACCAAGGACTATCTGTCACGGATATGGTAGCACTTGCAGGAGCCCACACAATTGGCATGGCACAGTGTAAGAATTTCCGGTCAAGAATTTATGGAGACTTGCAATCACCTTCAGTGAAAAATCCAATCTCTGAGAGTCACCTCAGCAACCTAAGATCTGTTTGTCCACCTATTAGAGGAGGAGACAATAACTTAACAGCAATGGACTATGTGACACCTAGTCTCTTTGACAATTCTTTCTACCAGTTACTACTAAATGGGGAGGGTCTTCTCAACTCAGACCAAGAAATGTACTCAAGTGTGTTTGGAATTGAAACAAGAGAGCTTGTCAAGAAGTATGCAGCAGATCCTCTGGCATTCTTCCAACAATTCTCAGAGTCAATGGTGAAAATGGGAAATATCACAAACTCAGAAAGCTTCATCACTGGGGAAGTTAGGAAGAATTGCAGATTTGTGAACACATGA 1725 0.52 MEDVMTEAAPPSRFLEEDLNIFTTPSPPLPKPFLISQPHTPSLLIVALPAPSLALFRRLRSSTPAASLLLPELPLSRPNHTADLFALSPSALLAAVPFPVPAHRAHALARALLSARMAPRSVLLLDSLQPPNFRGSLSSDETLAFKLETSAERKSADAEKMLPGVPYYPSGSVVDGLGAAILARCQVLNVRASLCVSWPRFDASVVSLVKGLLQRGVLRGFEFDLGDEDLKFGRTVTMVPSFPSKSLMHVVLIICFLGATRLHASDPPLTLDYYASTCPTVFDVVRKEMECSVLSDPRNAAMIVRLHFHDCFVQGCDGSVLLDDTITLKGEKKAATNTQSLKGLEIVDKIKNMIESECPGVVSCADILTIAARDAVILVGGPYWDVPVGRKDSVTANFDLANTNLPTPDESLLSIIAKFLYQGLSVTDMVALAGAHTIGMAQCKNFRSRIYGDLQSPSVKNPISESHLSNLRSVCPPIRGGDNNLTAMDYVTPSLFDNSFYQLLLNGEGLLNSDQEMYSSVFGIETRELVKKYAADPLAFFQQFSESMVKMGNITNSESFITGEVRKNCRFVNT 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00468 574 SUPERFAMILY Heme-dependent peroxidases 269 573 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca06g00468 574 Gene3D - 273 573 - -
Cca06g00468 574 PRINTS Haem peroxidase superfamily signature 489 504 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g00468 574 PRINTS Haem peroxidase superfamily signature 380 392 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g00468 574 PRINTS Haem peroxidase superfamily signature 362 379 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g00468 574 PRINTS Haem peroxidase superfamily signature 300 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g00468 574 PRINTS Haem peroxidase superfamily signature 428 443 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g00468 574 PRINTS Plant peroxidase signature 546 559 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00468 574 PRINTS Plant peroxidase signature 302 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00468 574 PRINTS Plant peroxidase signature 487 502 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00468 574 PRINTS Plant peroxidase signature 427 439 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00468 574 PRINTS Plant peroxidase signature 278 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00468 574 PRINTS Plant peroxidase signature 361 371 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00468 574 PRINTS Plant peroxidase signature 503 520 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00468 574 PRINTS Plant peroxidase signature 380 395 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00468 574 PRINTS Plant peroxidase signature 342 355 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00468 574 PANTHER PEROXIDASE 72-RELATED 257 572 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00468 574 ProSitePatterns Peroxidases proximal heme-ligand signature. 428 438 IPR019793 -
Cca06g00468 574 Gene3D Peroxidase, domain 2 406 551 - -
Cca06g00468 574 ProSitePatterns Peroxidases active site signature. 300 311 IPR019794 GO:0004601
Cca06g00468 574 Pfam Peroxidase 286 536 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g00468 574 PANTHER PEROXIDASE 11 257 572 - -
Cca06g00468 574 CDD secretory_peroxidase 269 572 IPR033905 GO:0004601|GO:0042744
Cca06g00468 574 ProSiteProfiles Plant heme peroxidase family profile. 268 573 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00468 Cca-Chr6 14261698 14268951 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00468 247 574 Peroxidase AT1G68850 72.340 1.03e-177 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00468 K00430 - gmx:100780750 629.017