Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00449 ATGAGGGACTTGAAAACTTTACAAGAATTAGTGGCAAGTATTACAGATTGGGAGGCGTTTAACGAGATAACGTTCAAACCCTTTGTGCCTAAACTTTTGGACGTGGCATTATGGCAACATGCACCACAATTTTATAGTGAAGAACAATTTGCTCAAATAAATCATTTTTCCAAGCTACATCTAGGATTTGGATTGCGATCAAGGGAAAAGAATACTAGAAAAAGACCAATTAGTGAGATGTCTAAGGAAGAAGACATGCCAGAGAACCAAACATCGAGAAAGAAAATTAAGATAAAGCATCCATCACCAAAATTGTCCATAGAATTCGAGAATCGAGTCAATGAGTTAAATGGTGGTGATATTACATTTCTCATGCAAAAGAAACTCTATCGTTCAGATTTGGACACGAATAAAAATCGTTTGTCAATGCCAAGAAACGAAATTAGGTGTGATTTCCTCACAGAAACTGAGATTGCAAAATTGAAGGAAAGAGAAGGCACTAGTGGAAAGGGAAAACTTGTTGGTGTGGAAGTGCATGTGTTGGACCCATGTCTTAGAGAATTCACTTTACTATTGAAGAAGTGGGATATGGAGAACACCTATACTTTAAACCTTTCAAAGCATTGGAATAATGTCGTCTCTACTAATAAGTTTGAAGAGAACCAAGAACTCTACATATGGACTTTTAGGGTGGATGAAAAATTATATTTTTTATTAAATAGGGTTTAA 729 0.3567 MRDLKTLQELVASITDWEAFNEITFKPFVPKLLDVALWQHAPQFYSEEQFAQINHFSKLHLGFGLRSREKNTRKRPISEMSKEEDMPENQTSRKKIKIKHPSPKLSIEFENRVNELNGGDITFLMQKKLYRSDLDTNKNRLSMPRNEIRCDFLTETEIAKLKEREGTSGKGKLVGVEVHVLDPCLREFTLLLKKWDMENTYTLNLSKHWNNVVSTNKFEENQELYIWTFRVDEKLYFLLNRV 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00449 242 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 2 240 IPR005508 GO:0003677
Cca06g00449 242 Gene3D - 114 241 IPR015300 -
Cca06g00449 242 PANTHER DUF313 DOMAIN PROTEIN 2 240 - -
Cca06g00449 242 MobiDBLite consensus disorder prediction 70 97 - -
Cca06g00449 242 Pfam B3 domain-containing protein At2g31720-like 114 214 IPR005508 GO:0003677
Cca06g00449 242 SUPERFAMILY DNA-binding pseudobarrel domain 123 238 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00449 Cca-Chr6 13875024 13875833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00449 113 239 B3 DNA Binding Superfamily AT1G05930 29.457 5.66e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00449 - - gmx:102663833 270.396