Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00448 ATGAGGGATTTGAAAACTTTACAGGAATTAGTGGCAAGTATTACAGATTGGGAGACGTTTGACAAGATGACATTCAAACCCTTTGTGCCTAAACTTTTGGACGCGACAATATGGCAACATGCACCACAATTTTATAGTGAAGAACAATTTGCTCAAATAAATCAATTTTCCAAGTTACATCTAGGATTCGAATTGAAGTCAAAGAGAAAAGATAGTAGAAAAAGACCAATTAGTGAGATGCCTAAGGAAGAAGACATGCCAGAGAACCAAACATCAAGAAAGAAAATCAAGATAAAGCATCCATCACCAAAATTGCCTATAGAATTCGAGAATCGAGTCAATGAGTTAAATGGTGGTGATATTACATTTCTCATGCAAAAGAAACTCTATCGTTCAGATTTGGACACGAATAAAAATCGTTTGTCAATGCCAAGAAACGAAATTAGGTGTGATTTCCTCACAGAAACTGAGATTGCAAAATTGAAGGAAAGAGAAGGCACTAGTGGAAAGGGAAAACTTGTTGGTGTGGAAGTGCATGTGTTGGACCCATGTCTTAGAGAATTCACTTTACTATTGAAGAAGTGGGATATGGAGAACACCTGTACTTTAAACCTTTCAAAGCATTGGAATAATGTCGTTTCTACTAATAAGTTTGAAGAGAACCAAGAACTCTACATATGGTCTTTTAGGGTGGAAGAAAATAAGCTATATTTTTTATTAAACAAGGTTTAA 732 0.3538 MRDLKTLQELVASITDWETFDKMTFKPFVPKLLDATIWQHAPQFYSEEQFAQINQFSKLHLGFELKSKRKDSRKRPISEMPKEEDMPENQTSRKKIKIKHPSPKLPIEFENRVNELNGGDITFLMQKKLYRSDLDTNKNRLSMPRNEIRCDFLTETEIAKLKEREGTSGKGKLVGVEVHVLDPCLREFTLLLKKWDMENTCTLNLSKHWNNVVSTNKFEENQELYIWSFRVEENKLYFLLNKV 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00448 243 Pfam B3 domain-containing protein At2g31720-like 114 214 IPR005508 GO:0003677
Cca06g00448 243 SUPERFAMILY DNA-binding pseudobarrel domain 123 236 IPR015300 -
Cca06g00448 243 MobiDBLite consensus disorder prediction 70 96 - -
Cca06g00448 243 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 2 241 IPR005508 GO:0003677
Cca06g00448 243 Gene3D - 114 242 IPR015300 -
Cca06g00448 243 PANTHER DUF313 DOMAIN PROTEIN 2 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00448 Cca-Chr6 13863591 13864403 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00448 115 232 B3 DNA Binding Superfamily AT1G05930 28.333 2.83e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00448 - - gmx:102663833 277.33