Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00409 ATGGCCACACAGTGGTTGATTGGCTTCTTGAACTTTTGGCACAGAGGAGAGGTTCGCACTGTGAGGATAAGGATCTTACCATGGCATGTGTTCCTTGGCCTATACACTTATGCATTGGCAATAGCAACAGCAGAAACTGGATTGCTAGAGAAATTAACATTCTTGCAAACAAAGAGAAATGTAGCCAAACACAGCACTGAGTCCATGGTGGTTAATAGTTTAGGCTTGGTTCTTGCCCTTCTCAGTGGCTTTGTTATTTTGGCTGCTGTTTCACCTAAGTATCATACAATTCAAAACAAACTTTTGTACTCAGATACCAAGTGTTTGTCATCTTAA 336 0.4107 MATQWLIGFLNFWHRGEVRTVRIRILPWHVFLGLYTYALAIATAETGLLEKLTFLQTKRNVAKHSTESMVVNSLGLVLALLSGFVILAAVSPKYHTIQNKLLYSDTKCLSS 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00409 111 Gene3D - 1 100 - -
Cca06g00409 111 Pfam Eukaryotic cytochrome b561 2 54 IPR006593 -
Cca06g00409 111 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 4-RELATED 2 111 - -
Cca06g00409 111 PANTHER CYTOCHROME B561-RELATED 2 111 IPR043205 GO:0016491
Cca06g00409 111 ProSiteProfiles Cytochrome b561 domain profile. 1 90 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00409 Cca-Chr6 12803724 12804059 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00409 2 111 Chloroplast and Mitochondria Gene Families AT1G26100 68.696 1.01e-43 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00409 K08360 - gmx:100781811 198.364