Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00392 ATGCAATTCAGCCAGAAAATGGGGTTACGTGAGTACATCGAAGCATTGGAGGAAGAAAGGAGAAAAATCCAAGTTTTCACCAAGGAGCTTCCTCTGTCGTTGGAGCTTGTAACGCAAGCCATTGAAGCGTGTAGGCAGCAACGAGGTAAAATTAAAATTCCAAAAAATTCTGGATCTTGCTTCGGAGTTCAAATTTTGGCGCTTTTTCTTGCATTAGTTTAG 222 0.4144 MQFSQKMGLREYIEALEEERRKIQVFTKELPLSLELVTQAIEACRQQRGKIKIPKNSGSCFGVQILALFLALV 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00392 73 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 5 51 IPR044787 GO:0003700|GO:0006355
Cca06g00392 73 Coils Coil 9 29 - -
Cca06g00392 73 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00392 Cca-Chr6 12150579 12152596 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00392 1 47 G2-like Transcription Factor Family AT1G25550 66.667 2.78e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00392 - - gmx:100799501 79.7221