Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00363 ATGGTTGTAGTTGTTAAGACGCCCAAAGGGAGGCCACTTGGCTCAAAGAGTAAGCCCAAACCGGCCATGGAAATTTACAAACCCATATTTCTAATTGTTCCCACTGGCATGGACATTGTCGATGCCATCAACTTCAGTCACAAGAAAGATGTTAGCATCATGGTGCACCATGCTTCAAGTGTCATTTCCAAAGTTAACATTTTCAATTCTTTGTCCCCTTCCAATTGTTTGTCCTTTCAGGGAAACTTGCATATGTTTTATCTCTTAGGCTTTTACACTAAAAGCCTTTCACCTTCTCCCCCTAAGAACATTCCTTATTCCTTTTTTAACATTCAATTCTTAAAGGATTGGACCCATCAAATCTATGGTGGCCTTGTTGGACACAAACTTATTATTGTAGAGCATGTGCGTGTCATGGCTTCTATGATCAAAAAACATGAGTATCACAAGGTGGTGAATCCCATCACATATCCAAATGTTCAACCTATTATGAAGAGTACTCATGCTACCCGCTATGTTGTTAATGGTCTCAATGATATCACCAATAACACTACGAATCACCCTAGTTTCTCTATTGGACCTTTAAGCTCATCTTTAATGAAAATCCAACCTCATGTTGATCCCCTAGAAATGTGA 636 0.3931 MVVVVKTPKGRPLGSKSKPKPAMEIYKPIFLIVPTGMDIVDAINFSHKKDVSIMVHHASSVISKVNIFNSLSPSNCLSFQGNLHMFYLLGFYTKSLSPSPPKNIPYSFFNIQFLKDWTHQIYGGLVGHKLIIVEHVRVMASMIKKHEYHKVVNPITYPNVQPIMKSTHATRYVVNGLNDITNNTTNHPSFSIGPLSSSLMKIQPHVDPLEM 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00363 211 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 5 168 - -
Cca06g00363 211 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 5 168 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00363 Cca-Chr6 11148540 11149175 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00363 2 151 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 31.098 8.28e-15 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00363 - - ccaj:109792018 262.307