Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00358 atgttggGAAACAAGAATGGGCTTCTCTTGCCCCATATCACCATAGACCAAGAGCTTCAACATTTGAGAAATAGTCTACCTGATCAAGTTCTTGTTCAGCTTATTGATGAAAGATTAACTGCTTTGGAAAATTGTATAGCATGTAATGACCATGTGGCCTTGACACGCATTGATCTTGACAAGATGTTCTTAAAAGGTGGATTGGTTCACCCTCATACATCCATTGAAGAATTGGAGGAACTTTCTACACTTCTTGATGTTACTTTGGTCGCTGGGACTGTCAATCGTGACAGTGAATTACTAGTTGCTGGCATGACAATAAATGATTGGATAGCATTTTGTGGTTCAGACACTACAGCTACAGAACTCTTTGTGATTGAGAGTATCTTCAAGCTGAGAGAAGTCCAATCCAGTGTCACTATGCATGAGATGAGGAAATCATTCTTTGATAGCTTTCTCTAA 462 0.3874 MLGNKNGLLLPHITIDQELQHLRNSLPDQVLVQLIDERLTALENCIACNDHVALTRIDLDKMFLKGGLVHPHTSIEELEELSTLLDVTLVAGTVNRDSELLVAGMTINDWIAFCGSDTTATELFVIESIFKLREVQSSVTMHEMRKSFFDSFL 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00358 153 SMART eIF6neu2 1 112 IPR002769 GO:0042256|GO:0043022
Cca06g00358 153 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 65 152 IPR002769 GO:0042256|GO:0043022
Cca06g00358 153 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 2 61 IPR002769 GO:0042256|GO:0043022
Cca06g00358 153 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 65 152 - -
Cca06g00358 153 SUPERFAMILY Pentein 2 132 - -
Cca06g00358 153 Pfam eIF-6 family 1 62 IPR002769 GO:0042256|GO:0043022
Cca06g00358 153 Pfam eIF-6 family 65 111 IPR002769 GO:0042256|GO:0043022
Cca06g00358 153 Gene3D - 1 63 - -
Cca06g00358 153 Gene3D - 64 133 - -
Cca06g00358 153 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 2 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00358 Cca-Chr6 10851657 10856248 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00358 3 153 Eukaryotic Initiation Factors Gene Family AT3G55620 61.878 1.64e-75 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00358 K03264 - ming:122066887 214.157