Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00321 ATGGTGACGAAGCTGGGAGTGGTGAAGGCGTGTTTGGTCGGCGCCACGCGCGGCCACGCGCTCCTAAAGAAGAGGAGCGACGCACTGACAATGCAGTTCCATCAGATCTTGAAGAAAATCGTGTCCACAAAGGAGTCAATGGGCGACATAATGGAATGTCGACGTTCGCGCTCACAGAGGCTAAGTACGTGGCCGGCGACCGCATCAAGCACGTGGTCCTCGAGAACGTGCGCGAGGCCTCGTTCCGCGTCCGCTCCCGCCAAAGAGAACGTCGCCGGCGTTGAGCTCCCCAAGTTCGACTATGTTGCCGACGCCGACGCCGCCAGAAGCGACCTCACCGGCCTCGACCACGGCAGCCAGCAGGTGCAGCAGGGCCGCGCCGCCTGCGTCAGGGCCATCGAGGTCCTTGTGGAACTCGCCTCGCTCCAGACCTCGTTTCTCACTGAAGTCGATGGCGGGGGCGCGCGGCGCCGCCAAGAGTGGAGAGAGGGCGAGTGGGGTTTCGCTCAAGTTGCCACCGCTGGCTTCATATTCTGA 537 0.6276 MVTKLGVVKACLVGATRGHALLKKRSDALTMQFHQILKKIVSTKESMGDIMECRRSRSQRLSTWPATASSTWSSRTCARPRSASAPAKENVAGVELPKFDYVADADAARSDLTGLDHGSQQVQQGRAACVRAIEVLVELASLQTSFLTEVDGGGARRRQEWREGEWGFAQVATAGFIF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00321 178 Gene3D - 2 150 - -
Cca06g00321 178 PANTHER V-TYPE PROTON ATPASE SUBUNIT D-RELATED 2 148 - -
Cca06g00321 178 Pfam ATP synthase subunit D 6 147 IPR002699 GO:0046961
Cca06g00321 178 TIGRFAM V_ATPase_subD: V-type ATPase, D subunit 5 146 IPR002699 GO:0046961
Cca06g00321 178 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 2 148 IPR002699 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00321 Cca-Chr6 8737672 8738208 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00321 2 148 Primary Pumps ATPases(2) AT3G58730 54.667 6.70e-45 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00321 K02149 - gmx:100801612 166.007