Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00315 ATGGTTAAGTGCAACCTGAAGTTGAGCATCCCAGGAAGGCATATGGATGAGCAGCAAGGGATTCATCTGGTCTTTTCTTCCCTTTTTTTCTCTCCCCTTTTTTGTTCTCTAGAAGGGAAACAGGAGAGAAAGACACGTGAGATTGTTGGAGAAGTGAGAGAAGTGGGAAGCAAAGTAGAAAAGTTAAAGGTTGGAGACAAGGTGGCTGTGGGGTGCTTGGTTGGGTGGTGCCACACGTGCGAAAACTGTGTGAAGAATCTTGAGAATTATTGCCAAAAGGCGATTCCCACGTATGGTGCAGAGTATGAAGATGGGAGCATGAGTTATGGGGGATTCTCTGACTTGATGGTTGCAGACCAGCACTTTGTTGTGGCCATTCCAAATGGGCTACCTCTTGATGCTGCTGCTCCTCTCCTCTGTGCAGGGATCACAGTCTATGGGCCTTTGAGATGTTTTGGGCTTCACAAGCCTGGCATGCATCTGGGTGTCGTGGGCCTTGGTGGATTGGGCCATCTTGCTGTCAAGTTTGCAAAAGCCCTTGGCTTGAAGGTCACTGTCATCAGCACCTCTGCTCTCATGCTAAAAAACAAGAAGCCATGCAACATCTTGGAGCACATTCCTTTGTTGTCAGTAGAGACAAAGACCAAATGCAGGCTGCAATGTGCACCTTGGATGGCATAA 681 0.4802 MVKCNLKLSIPGRHMDEQQGIHLVFSSLFFSPLFCSLEGKQERKTREIVGEVREVGSKVEKLKVGDKVAVGCLVGWCHTCENCVKNLENYCQKAIPTYGAEYEDGSMSYGGFSDLMVADQHFVVAIPNGLPLDAAAPLLCAGITVYGPLRCFGLHKPGMHLGVVGLGGLGHLAVKFAKALGLKVTVISTSALMLKNKKPCNILEHIPLLSVETKTKCRLQCAPWMA 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00315 226 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 144 200 IPR036291 -
Cca06g00315 226 Pfam Alcohol dehydrogenase GroES-like domain 47 125 IPR013154 -
Cca06g00315 226 PANTHER ALDEHYDE REDUCTASE 45 192 - -
Cca06g00315 226 SUPERFAMILY GroES-like 47 158 IPR011032 -
Cca06g00315 226 Gene3D - 47 140 - -
Cca06g00315 226 Gene3D - 141 191 - -
Cca06g00315 226 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 45 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00315 Cca-Chr6 8598724 8600784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00315 47 190 Monolignol Biosynthesis Gene Families AT4G37990 65.972 2.79e-53 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00315 - - gmx:100812491 244.973