Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00314 ATGGCCTCTGGAGAAGGGAGGCGTCGTGGTCATGATCTTGTGCCTCTTGCCGCATTGCTCACCAGAGAGATGAAGAACGAGAAGATGGAGAAGCCCACTATGCGGTATGGATATGCTGCTCAATCTAAAAAAGGGGAGGATTACTTCCTAATCAAGACTGATTGTCGGCGAGTTCCTGGGAATTCTTCAGCATCATTTTCTGTATTCGCGATCTTTGATGGGCACAATGGAAATGCTGCAGCCATTTTTACTCGGGAGCATTTGTTAAATCATGTGTTGGGTGCTCTCCCTCGAGGGCTTGGAAGAGACGAGTGGCTACAAGCTTTACCTCGGGCATTGGTTGCGGGATTTGTGAAGACTGACAAGGAATTTCAGAGAAGAGGAGAAACTTCTGGAACCACGGCCACGTTTGTGATAGTGGATAGGTGGACTGTAACAGTTGCTTCTGTCGGAGATTCCCGTTGTATACTAGATGTGCAGGGTGGTGCTGTTACCAACTTAACTGTTGATCACAGACTTGAGGAGAATATTGAAGAGAGGGAACGTGTTACTGCAAGTGGAGGGGAAGTTGGAAGACTTAGCATTGTTGGTGGTGTTGAGATTGGTCCACTTCGTTGCTGGCCTGGGGGTCTATGCCTTTCTAGGTCAATAGGAGACATGGATGTTGGGGAGTTTATAGTTCCAGTACCATATGTCAAACAAGTAAAGCTATCAAAGGCTGGTGGGAGACTTATAATTGCCTCTGATGGTATCTGGGATGCTCTATCATCTGAAATGGCAGCAAAATCTTGTCATGGTTTGCCTGCTGAACTGGCTGCGAAGCAGGTTGTAAAGGAAGCACTTAGAACAAGAGGGTTAAAGGATGATACAACTTGTGTTGTAGTTGATATAATTCCACCTGATAATGAATTGCCACTGCCACTGCCTCCCCCCAAAAAGCGGAACAAGTTGAGTGCTCTTTTGTTTTGGAAGAGGTCTCGCAACTCGGCTGGTAAGCTGTCAAAAAAGCTTTCAGCTATAAATATAGTGGAGGAACTATTTGAAGAAGGATCAGCAATGCTCGCGGAAAGATTAGGAAACGATGAAAACTCAGGTCAATCAACATCTGGCATTTTCGTCTGTGCCGTGTGCCAGGTTGACCTTGCTTCAAGCGAGGGCATTTCGGTCCACGCAGGTTCCATTTTCTCCACCAGCTCAAAGCCATGGCAAGGTCCTTTTCTGTGTGCTGATTGTCGCAACAAGAAGGATGCTATGGAAGGAAAACGCCCTAGTGGAGTTAAAGTGTCATAG 1290 0.4651 MASGEGRRRGHDLVPLAALLTREMKNEKMEKPTMRYGYAAQSKKGEDYFLIKTDCRRVPGNSSASFSVFAIFDGHNGNAAAIFTREHLLNHVLGALPRGLGRDEWLQALPRALVAGFVKTDKEFQRRGETSGTTATFVIVDRWTVTVASVGDSRCILDVQGGAVTNLTVDHRLEENIEERERVTASGGEVGRLSIVGGVEIGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSKAGGRLIIASDGIWDALSSEMAAKSCHGLPAELAAKQVVKEALRTRGLKDDTTCVVVDIIPPDNELPLPLPPPKKRNKLSALLFWKRSRNSAGKLSKKLSAINIVEELFEEGSAMLAERLGNDENSGQSTSGIFVCAVCQVDLASSEGISVHAGSIFSTSSKPWQGPFLCADCRNKKDAMEGKRPSGVKVS 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00314 429 SMART PP2C_4 25 295 IPR001932 -
Cca06g00314 429 SUPERFAMILY PP2C-like 25 297 IPR036457 -
Cca06g00314 429 SMART PP2C_SIG_2 50 297 IPR001932 -
Cca06g00314 429 CDD PP2Cc 36 297 IPR001932 -
Cca06g00314 429 Pfam Protein phosphatase 2C 61 282 IPR001932 -
Cca06g00314 429 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Cca06g00314 429 PANTHER ALPHABET, ISOFORM E-RELATED 2 428 - -
Cca06g00314 429 Gene3D - 33 301 IPR036457 -
Cca06g00314 429 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 2 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00314 Cca-Chr6 8590259 8593591 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00314 1 428 PP2C-type Phosphatase Gene Family AT1G68410 78.899 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00314 - - gmx:100779571 751.895