Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00312 ATGCAGATTGGTCCACTTCGTTGCTGGCCTGGGGGTCTATGCCTTTCTAGGTCAATAGGAGACATGGATGTTGGGGAGTTTATAGTTCCAGTACCATATGTCAAACAAGTAAAGCTATCAAAGGCTGGTGGGAGACTTATAATTGCCTCTGATGGTATCTGGGATGCTCTATCATCTGAAATGGCAGCAAAATCTTGTCATGGAATTTCAGAGAAGAGGAGAAACTTCTGGAACCACGGCCACGGTGGTGCTGTTACCAACTTAACTGTTGATCACAGACTTGAGGAGAATATTGAAGAGAGGGAACGTGTTACTGCAAGTGGAGGGGAAGTTGGAAGACTTAGCATTGTTGGTGGTGTTGAGATTGGTCCACTTCGTTGCTGGCCTGGGGGTCTATGCCTTTCTAGGTCAATAGGAGACATGGATGTTGGGGAGTTTATAGTTCCAGTACCATATGTCAAACAAGTAAAGGAAGCACTTAGAACAAGAGGGTTAAAGGATGATACAACTTGTGTTGTAGTTGATATAATTCCACCTGATAATGAATTGCCACTGCCACTGCCTCCCCCCAAAAAGCGGAACAAGTTGAGTGCTCTTTTGTTTTGGAAGAGGTCTCGCAACTCGGCTGGTAAGCTGTCAAAAAAGCTTTCAGCTATAAATATAGTGGAGGAACTATTTGAAGAAGGATCAGCAATGCTCGCGGAAAGATTAGGAAACGATGAAAACTCAGGTCAATCAACATCTGGCATTTTCGTCTGTGCCGTGTGCCAGGTTGACCTTGCTTCAAGCGAGGGCATTTCGGTCCACGCAGGTTCCATTTTCTCCACCAGCTCAAAGCCATGGCAAGGTCCTTTTCTGTGTGCTGATTGTCGCAACAAGAAGGATGCTATGGAAGGAAAACGCCCTAGTGGAGTTAAAGTGTCATAG 927 0.4542 MQIGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSKAGGRLIIASDGIWDALSSEMAAKSCHGISEKRRNFWNHGHGGAVTNLTVDHRLEENIEERERVTASGGEVGRLSIVGGVEIGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKEALRTRGLKDDTTCVVVDIIPPDNELPLPLPPPKKRNKLSALLFWKRSRNSAGKLSKKLSAINIVEELFEEGSAMLAERLGNDENSGQSTSGIFVCAVCQVDLASSEGISVHAGSIFSTSSKPWQGPFLCADCRNKKDAMEGKRPSGVKVS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00312 308 Gene3D - 78 177 IPR036457 -
Cca06g00312 308 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 81 157 - -
Cca06g00312 308 PANTHER ALPHABET, ISOFORM E-RELATED 6 69 - -
Cca06g00312 308 PANTHER ALPHABET, ISOFORM E-RELATED 156 307 - -
Cca06g00312 308 SUPERFAMILY PP2C-like 81 176 IPR036457 -
Cca06g00312 308 PANTHER ALPHABET, ISOFORM E-RELATED 81 157 - -
Cca06g00312 308 Pfam Protein phosphatase 2C 83 157 IPR001932 -
Cca06g00312 308 Pfam Protein phosphatase 2C 13 69 IPR001932 -
Cca06g00312 308 Gene3D - 1 77 IPR036457 -
Cca06g00312 308 ProSiteProfiles PPM-type phosphatase domain profile. 1 176 IPR001932 -
Cca06g00312 308 SUPERFAMILY PP2C-like 11 68 IPR036457 -
Cca06g00312 308 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 6 69 - -
Cca06g00312 308 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 156 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00312 Cca-Chr6 8573859 8577116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00312 1 70 PP2C-type Phosphatase Gene Family AT1G68410 87.143 2.84e-36 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00312 - - tcc:18609180 368.622