Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00311 ATGGTCTTCCTCATGGGCAAAAAGGTTTACTTCACAAGTTATGAGCAACTAAAGGCCCTGCTTCGTTCACGTGATGGTTGCAATGAACTCACGACAATTGGAAATATTATAGCTGCTGCTGGTGCTGGGGCAGCAACAGCGATTTCTACAAATCCATTGTGGGTTGTCAAGACAAGACTTCAAACGCAAGGAATGAGGCCTGGTGTTGTTCCATACAAGAGCGTTCTTAGTGCTTTGACAAGGATTACACACGAGGAAGGCATACGAGGCCTTTATAGTGGCATTGTTCCTTCATTGGCTGGCGTAAGTCATGTTGCAATTCAGTTTCCAGCATACGAGAAGATCAAGTCTTACATGGCAGAAAAAGATAACACAACTGTTGACAAGCTAACTCCTGGGAGTGTTGCCATTGCATCATCAATTTCAAAAGTATTTGCCTCTGTAATGACCTATCCACATGAGGTGATACGATCTCGGTTGCAAGAACAAGGGCAGGCAAAAAATATTGGTGTACAATATGCAGGGGTTATCGACTGTACTAAAAAGGTGTTTCAAAAAGAAGGCATTGCAGGCTTTTATCGTGGTTGTGCTACCAATCTATTAAGAACAACACCATCTGCTGTTATTACATTCACTAGTTATGAGATGATACACAGGTTTTTGGAGCAAACTATGCCTCGGGACAAGGGGTATCCTCAAGGCCGTTCTAAATCCAATGAACTTAACAAGCCCCACCCCAGAAGCCAGTGGCACTGA 756 0.4352 MVFLMGKKVYFTSYEQLKALLRSRDGCNELTTIGNIIAAAGAGAATAISTNPLWVVKTRLQTQGMRPGVVPYKSVLSALTRITHEEGIRGLYSGIVPSLAGVSHVAIQFPAYEKIKSYMAEKDNTTVDKLTPGSVAIASSISKVFASVMTYPHEVIRSRLQEQGQAKNIGVQYAGVIDCTKKVFQKEGIAGFYRGCATNLLRTTPSAVITFTSYEMIHRFLEQTMPRDKGYPQGRSKSNELNKPHPRSQWH 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00311 251 MobiDBLite consensus disorder prediction 225 251 - -
Cca06g00311 251 ProSiteProfiles Solute carrier (Solcar) repeat profile. 30 118 IPR018108 -
Cca06g00311 251 MobiDBLite consensus disorder prediction 235 251 - -
Cca06g00311 251 Gene3D Mitochondrial carrier domain 4 232 IPR023395 -
Cca06g00311 251 ProSiteProfiles Solute carrier (Solcar) repeat profile. 130 220 IPR018108 -
Cca06g00311 251 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 4 229 - -
Cca06g00311 251 Pfam Mitochondrial carrier protein 30 121 IPR018108 -
Cca06g00311 251 Pfam Mitochondrial carrier protein 131 222 IPR018108 -
Cca06g00311 251 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 4 229 IPR044712 GO:0006862|GO:0055085
Cca06g00311 251 SUPERFAMILY Mitochondrial carrier 8 216 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00311 Cca-Chr6 8545158 8550754 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00311 9 240 Chloroplast and Mitochondria Gene Families AT1G25380 68.966 1.07e-109 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00311 K15115 - gmx:100816376 439.113