Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00189 ATGTTTCTTCGTTGGTGCTGCTTTGCATGTCTCTTTCTCTTGGTGGGTTTGAGAGCTAATGCTCAGATTTATAGAAAAGTTGGACAGAAAAAGCTCCCTTACTGGTCAATAGTGGTGGATCCATCAGGGCATGGAAACTTCTCCACCATACAATCTGCCATTGATTCAGTCCCTTCTAACAATAAGTATTGGGTTTCCATCAAGATCATGGCAGGTACCTACAGAGAAAAAGTGACGATTCCTAATGATAAGCCTTACATCATTCTAAAAGGAAAGGGAAAGATAATGAGAAGAACTGTTGTTGAGTGGGGTGATCACGATAATACCTCGCAGAGTCCTACGTTCACATCCATGGCTGGGAATATTGTTGTCAAATCCATGAGCTTTAGGAATTCATACAACAATCCAATGAATGGTAAGAGCAATGTTGTAGCTGCTGTAGCTGCGATGATAAGTGGCGACAAGTCATACTTTTTGAGAGTTGGGTTCTATGGTTTTCAAGACACTTTATGGGACGACGCAGGAAGACATTACTACAAGCTTTGTACCATACAAGGTGCTGTTGATTTTATCTTTGGTGCAGCCCAATCTTTATTTGAGAGGTGTTCTATATCTGTGATTGGTGGGGCCCTAGATCCGGGCCTTCCGGGCTTTATAACGGCCCAAGGGAGAACAAATTCAGAAGATGAAAGTGGGTTTGTTTTCAAAGAATGCAAAGTGTTTGGAAATGGGACAACATACTTGGGGAGGCCATGGAGAAGTAATGCTAGGGTTTTCTTCTATAAGACCAATATGTCCAACATTATACAACCTACTGGTTGGAATGCATGGAATTTTGCTGGACATGAGGGTGGCATAACATTTGCAGAGTATGGAAATTTTGGAGCAGGTTCAGACACGTCTAAGAGAGTGAATTGGACTAAGAAATTGGATTTAAAAACAATTGAGAACATGACAAACACAAAGTTCATTGACACTGATGGGTGGCTTCAGAACCTACCCTCCTAA 1008 0.4157 MFLRWCCFACLFLLVGLRANAQIYRKVGQKKLPYWSIVVDPSGHGNFSTIQSAIDSVPSNNKYWVSIKIMAGTYREKVTIPNDKPYIILKGKGKIMRRTVVEWGDHDNTSQSPTFTSMAGNIVVKSMSFRNSYNNPMNGKSNVVAAVAAMISGDKSYFLRVGFYGFQDTLWDDAGRHYYKLCTIQGAVDFIFGAAQSLFERCSISVIGGALDPGLPGFITAQGRTNSEDESGFVFKECKVFGNGTTYLGRPWRSNARVFFYKTNMSNIIQPTGWNAWNFAGHEGGITFAEYGNFGAGSDTSKRVNWTKKLDLKTIENMTNTKFIDTDGWLQNLPS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00189 335 Pfam Pectinesterase 37 326 IPR000070 GO:0030599|GO:0042545
Cca06g00189 335 PANTHER PECTINESTERASE 10-RELATED 7 334 - -
Cca06g00189 335 ProSitePatterns Pectinesterase signature 2. 184 193 IPR033131 -
Cca06g00189 335 Gene3D - 35 334 IPR012334 -
Cca06g00189 335 SUPERFAMILY Pectin lyase-like 36 331 IPR011050 -
Cca06g00189 335 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00189 Cca-Chr6 4581569 4586687 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00189 36 283 Carbohydrate Esterase AT2G19150 48.193 5.74e-77 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00189 - - gmx:100819252 541.576