Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00156 ATGCATTTGCAACTTGGGGAGGTCTTCACAATCATTGTTTCCTCACCAGAGTATGCTAAGGAGATAATGAAAACCCATGATGTCATTTTTGCAACAAGGCCAAAACTTGTAGTATCAGATATAGTAGCCTATGAATCCACAGACATTATTTTTTCACCTTATGGCAGCTATTGGAGACAACTACGAAAAATATGCACAATGGAGCTTTTCACCCAAAAATGTGTCGATTCGTTCAAGCCAATAAGAGAAGAGGAGTTCACAAATCTCATCAAAATTATTGATTCACATAAAGGATCTCCCTTCAACCTCTCTGAAGCAGTAACTTTATCAATATATAATATCGTTTCAAGAGTTGCTTTTGGCAAGAAATGCAAAGACCAAGAAGAATTCATATCAGCGATGAAAGAAGTATTATTAGTTGGATCAGGTTTTCACATAGGAGATTTGTTTCCTTCTGCCGAATGGCTTCAACATGGTACATGTTTGAGGCCTAAGCTTCAGAGGTTGCATCGACAAGTTGATCGAATACTGGAAGAAATCATCGATGAACACAAAGAGGCAAAGTCAAAAGTCAAAGAAGGAAAAGGTGAAGTAGAGGGAGATTTAGTACATGTTCTCCTAAAGTTCCATGATGATAATGATAGCAACAAGGATATTTGCTTAACTATTAACAATATCAAGGCCATAATACTGGATATCTTTGGTGCTGGTGGTGAGACATCAGGAACAACCATAAATTGGGCAATGGCAGAGATGATAAAGGATCCAAGAGTGATGAAGAAAACACAAGCTGAGATAAGACAGGTATTCAACTTGAAAGGATGTATTGATGAAATTTGTGTCAATGAACTCAAGTATTTGAAATCAGTTGTCAAAGAGACACTACGGCTACACCCACCACTTCCTTTTTTATTTCCAAGGGAATGTAGACAATCATGTGAGATTGACAGGTATGATATACCTGTCAAAAGTAAGGTAATGATCAATGCTTGGGCAATTGGAAGAGATCCAAACTGTTGGACTGAACCAGAGAGGTTTTATCCAGAGAGATTCATTGATAACTCTTTTGACTACAAGGGGAGTAACTTTGGGTACATTCCATTTGGTGCTGGAAGAAGAATATGTCCAGGTGGGAACTTTGGTATAATAAATGTTGAGTTATGCCTTGCATTCTTGTTGTATCACTTTGATTGGAAGCTTCCTGTTGGGATGAAAAGTGAAGACATTGACATGACTGAAGAATTTGGATTGACTGTTTCAAGAAAAGATGAACTATACTTGATTCCTATCACTTCTATTCCTTTCCATGCAATATAA 1317 0.3736 MHLQLGEVFTIIVSSPEYAKEIMKTHDVIFATRPKLVVSDIVAYESTDIIFSPYGSYWRQLRKICTMELFTQKCVDSFKPIREEEFTNLIKIIDSHKGSPFNLSEAVTLSIYNIVSRVAFGKKCKDQEEFISAMKEVLLVGSGFHIGDLFPSAEWLQHGTCLRPKLQRLHRQVDRILEEIIDEHKEAKSKVKEGKGEVEGDLVHVLLKFHDDNDSNKDICLTINNIKAIILDIFGAGGETSGTTINWAMAEMIKDPRVMKKTQAEIRQVFNLKGCIDEICVNELKYLKSVVKETLRLHPPLPFLFPRECRQSCEIDRYDIPVKSKVMINAWAIGRDPNCWTEPERFYPERFIDNSFDYKGSNFGYIPFGAGRRICPGGNFGIINVELCLAFLLYHFDWKLPVGMKSEDIDMTEEFGLTVSRKDELYLIPITSIPFHAI 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00156 438 Pfam Cytochrome P450 3 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00156 438 Coils Coil 166 197 - -
Cca06g00156 438 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 368 377 IPR017972 GO:0005506|GO:0016705
Cca06g00156 438 Gene3D Cytochrome P450 1 427 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00156 438 SUPERFAMILY Cytochrome P450 2 429 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00156 438 PANTHER CYTOCHROME P450 71B11-RELATED 1 432 - -
Cca06g00156 438 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 432 - -
Cca06g00156 438 PRINTS E-class P450 group I signature 245 271 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00156 438 PRINTS E-class P450 group I signature 110 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00156 438 PRINTS E-class P450 group I signature 225 242 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00156 438 PRINTS E-class P450 group I signature 329 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00156 438 PRINTS E-class P450 group I signature 375 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00156 438 PRINTS E-class P450 group I signature 288 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00156 438 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00156 438 PRINTS E-class P450 group I signature 365 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00156 438 PRINTS P450 superfamily signature 366 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00156 438 PRINTS P450 superfamily signature 236 253 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00156 438 PRINTS P450 superfamily signature 289 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00156 Cca-Chr6 3590769 3593905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00156 1 430 Cytochrome P450 AT3G26320 41.876 2.03e-117 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00156 - - gmx:102665189 674.47