Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00150 ATGGATCGTTCTGCGATGACTGTTGGGCCTGGAATGGACTTGCCAATCATGCATGACAGTGACAGGTATGAGCTGGTGCGTGATATTGGCTCTGGAAATTTTGGGGTGGCAAGGCTCATGCGGGACAAGCACACTGAGGAACTTGTTGCTGTCAAGTATATTGAGAGAGGTGATAAGATAGATGCAAATGTACGAAGGGAAATTATAAATCACAGATCACTGAGGCATCCCAATATTGTCAGGTTCAAGGAGGTCATATTGACCCCTACACATTTGGCTATTGTGATGGAATATGCTTCTGGAGGAGAGTTATTTGAGCGAATATGCAATGCAGGACGATTTAGTGAAGATGAGGCACGCTTCTTCTTCCAACAACTTATATCAGGGGTTAGCTACTGTCATGCAATGCAAGTATGCCATCGTGACTTAAAGTTGGAGAACACGTTGTTGGATGGTAGTCCAGCTCCTCGTTTGAAGATTTGTGATTTTGGTTATTCTAAGTCCTCAGTGCTACATTCACAACCAAAATCTACTGTTGGTACCCCTGCATACATAGCTCCTGAAGTTTTGCTTAAGAAAGAATATGATGGCAAGATTGCAGATGTTTGGTCTTGTGGGGTGACCTTATATGTCATGTTGGTGGGTGCATATCCTTTTGAGGATCCTGAGGAACCTAAAAATTTCCGCAAGACGATTCATAGGATTTTGAAAGTCCAGTACTCAATTCCTGATTATGTTCATGTATCTCCCGAGTGCCAGCATCTAATATCAAGGATCTTTGTTGCAGACCCTGCACAGAGAATAAGTATTCCTGAGATCCGAAACCACGAATGGTTTTTGAGGAACCTTCCAGCTGATCTCATGGTCGAGAACACGATGAACAACCAGTTTGAGGAGCCTGATCAACCAATGCAGAGCATTGAAGAAATCATGCAGATAATCAGTGAGGCTACAATTCCTGCAGCTAGAACTCAGTCTCTCAACCAGTATCTAACCGGTAGCTTGGACATTGATGACGACGACATGGACGAGGACGACCAAGAGTCAGATCTTGATATTGATAGCAGTGGAGAAATAGTTTATGCAATGTAA 1092 0.4332 MDRSAMTVGPGMDLPIMHDSDRYELVRDIGSGNFGVARLMRDKHTEELVAVKYIERGDKIDANVRREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILKVQYSIPDYVHVSPECQHLISRIFVADPAQRISIPEIRNHEWFLRNLPADLMVENTMNNQFEEPDQPMQSIEEIMQIISEATIPAARTQSLNQYLTGSLDIDDDDMDEDDQESDLDIDSSGEIVYAM 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00150 363 MobiDBLite consensus disorder prediction 336 353 - -
Cca06g00150 363 SUPERFAMILY Protein kinase-like (PK-like) 15 317 IPR011009 -
Cca06g00150 363 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g00150 363 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2E 14 358 - -
Cca06g00150 363 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g00150 363 Gene3D Transferase(Phosphotransferase) domain 1 99 287 - -
Cca06g00150 363 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Cca06g00150 363 MobiDBLite consensus disorder prediction 335 356 - -
Cca06g00150 363 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g00150 363 PANTHER SERINE/THREONINE KINASE 14 358 - -
Cca06g00150 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Cca06g00150 363 CDD STKc_SnRK2-3 22 278 - -
Cca06g00150 363 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00150 Cca-Chr6 3423717 3428513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00150 22 283 CBL-interacting serine-threonine protein kinases AT5G25110 44.526 8.97e-69 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Cca06g00150 Pkinase 9.9e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00150 K14498 - gmx:100804702 681.019