Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00126 ATGGCCTCAGAATCATCCAACAATGAACTCCTCCAACTCCCAGTGAGGCCAATCCCGGGCACCTACGGGCTCCCCTTGATGGGAGCAATCAGGGACCGACACGACTACTTCTACCACCAAGGGAGAGACAAGTTCTTCGCCACCAGAATCCGCACCCACAACTCCACCGTCATCCGCACCAACATGCCTCCGGGACCCTTCGTCTCCCGCGACCCACGCGTCATAGCGCTACTGGACGGAGCCTCCTTCCCCATCCTCTTCGACAACCAGAGGGTCCAAAAGCTCGACGTCCTCGACGGCACCTTCATGCCCTCCGCCGCCTTCACCGGCGGCCACCGCGTCTGCGCCTACCTCGACACCCGAGAACCCAACCACGCGCTGCTCAAGCGCTTCTTCCTCCTCGCCCTTGCCAACCGGAAAGACGCTTTCCTCCCTCTCTTCCGTAACTGCCTCCAGGAGGCCTTCGCCCAGATCGAGGACGCCTTCGCCCAAACCGCTCTNNNNNNNNNNNNNTCAGCCACGCCTCCTTCAACTTCATCTTCAGGTTGTTCTGTAACGACAAACACCCTTCCCACACCAACCTCGCTTCTAAGGGGCCAAAGCTACTACAACACCCTGTACGAGGCCTTCAAAGCCCACGCCACCGCCCTCCTGGACGAGGCCCAAAGCCTGGGCCTGGACCGAAACGAGGCCTGCCACAACGTGGTTTTCCTGGCGGGCTTCAACGCCTACGGCGGGCTCAAAAACCAGTTCCCCGTATTAATAAAATGGGTGGGCCAGGGTGGGGAGAAGCTCCACGCGGAGCTGGCGCGTGAGGTCCGGCGCGTGGTGAGCGAGGAGGGCGGGGTGACGCTCTCGGCGCTGGACAAAATGAGTCTGGTGAAGTCCGTGGTGTACGAGGTGATGCGAATCGAGCCTGCGGTGCCGTACCAATACGCACGTGCGAGGGAGGACTTGGTGGTGCAGAGCCACGACGCGTCGTTTCACGTAAAGAAGGGGGAGATGCTGTTCGGGTACCAACCCTTGGCGACCAGAGATTCCAGAATCTTCGAGGATGCCGAGGTTTTCGTGGCGCAGAGGTTTGTGGGCGAGGGGGAGAAGATGCTGAAGCACGTGCTTTGGTCCAACGGGAGGGAGACGGATGAGCCTTCGATTAATAACAAGCAGTGTCCTGGCAAGAATCTGGTGGTGCTGCTGTGCAGGTTGTTTCTCGTGGACTTCTTCTTGCGCTACGACACCTTTGACTTTCACTTTAAACAATCTGCCTTCGGTCCTACTGTTACCCTTAAGTCCCTCACCAAGGCATCCTCCTTCACTTGA 1320 0.5841 MASESSNNELLQLPVRPIPGTYGLPLMGAIRDRHDYFYHQGRDKFFATRIRTHNSTVIRTNMPPGPFVSRDPRVIALLDGASFPILFDNQRVQKLDVLDGTFMPSAAFTGGHRVCAYLDTREPNHALLKRFFLLALANRKDAFLPLFRNCLQEAFAQIEDAFAQTAXXXXXSATPPSTSSSGCSVTTNTLPTPTSLLRGQSYYNTLYEAFKAHATALLDEAQSLGLDRNEACHNVVFLAGFNAYGGLKNQFPVLIKWVGQGGEKLHAELAREVRRVVSEEGGVTLSALDKMSLVKSVVYEVMRIEPAVPYQYARAREDLVVQSHDASFHVKKGEMLFGYQPLATRDSRIFEDAEVFVAQRFVGEGEKMLKHVLWSNGRETDEPSINNKQCPGKNLVVLLCRLFLVDFFLRYDTFDFHFKQSAFGPTVTLKSLTKASSFT 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00126 439 PANTHER CYTOCHROME P450 26 187 436 - -
Cca06g00126 439 Gene3D Cytochrome P450 10 437 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00126 439 PANTHER CYTOCHROME P450 26 8 169 - -
Cca06g00126 439 PANTHER FATTY ACID HYDROPEROXIDE LYASE 187 436 - -
Cca06g00126 439 PANTHER FATTY ACID HYDROPEROXIDE LYASE 8 169 - -
Cca06g00126 439 Pfam Cytochrome P450 266 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00126 439 SUPERFAMILY Cytochrome P450 12 412 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00126 Cca-Chr6 3004771 3009540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00126 13 436 Cytochrome P450 AT5G42650 44.872 9.72e-139 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00126 K01723 - egr:104454962 483.026