Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00117 ATGAATCCAATGTCGATCAAACTGGACGATGCCAATTTCTCAACCTGGAAGAAGGAAGCCTTAGAAGCAATCAAGGCAGGCAAAGTTGAAAAGTTCATCGCAAAAACGAATGATGGAGGAAGGCCACACAAGTTTAAAACACCTGAAGATGAAGTTCTTGGAAATATCAGTGAAGAATACAAAAattgggagcagaaggatcaggCTTTCTTAGAACAAAAACAATATGAAGAGCTAAGTAAAAAAGTGAAAACTCTGAAAGGTGAAAACTCCATTCTCGCACAGAGGCTTGAGAATCTTGCTGAGGAGTGTCTGGAGGTCAGCTATGAAAACGATGCCATAGAGAAAGAGCTGGTTGAGAAGTATGGAGCAGAATCAGTAGCAGATCTATTGCCAGAGAGGCCTGCCTGA 411 0.3917 MNPMSIKLDDANFSTWKKEALEAIKAGKVEKFIAKTNDGGRPHKFKTPEDEVLGNISEEYKNWEQKDQAFLEQKQYEELSKKVKTLKGENSILAQRLENLAEECLEVSYENDAIEKELVEKYGAESVADLLPERPA 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00117 136 Coils Coil 76 117 - -
Cca06g00117 136 PANTHER BZIP TRANSCRIPTION FACTOR 65 135 - -
Cca06g00117 136 PANTHER G-BOX-BINDING FACTOR 3-RELATED 65 135 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00117 Cca-Chr6 2827990 2829006 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00117 73 130 bZIP Transcription Factor Family AT4G36730 39.655 5.06e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00117 - K17589 ccaj:114915994 132.494