Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00111 ATGAAAGGAAGGGTTGATGAAATTTGCATCAATGAACTCAAATATTTGAAATCAATTGTCAAAGAAACCTTAAGGCTACACCCTCCAGAACCAAAAAGGTTTTATCCAGAGAGATTCATTGATAACTCTATTGACTACAAAGGGTATAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGCCCAGACATCATCACCTTGGCTTCAGTAAATGTTGAGCTGGCACTTGCACTTTTATTGTATCACTTTGATTGGAAGTTTCCAAATGGAATGAAAAGTGAGGAATTGGACATGACTGAGGAATTTGGAGCATCTGTTAGAAGAAAAGATGACCTATACTTAATATACCTGTCACTTCTCGTCCTTTCCTAG 378 0.3677 MKGRVDEICINELKYLKSIVKETLRLHPPEPKRFYPERFIDNSIDYKGYNFEYIPFGAGRRICPDIITLASVNVELALALLLYHFDWKFPNGMKSEELDMTEEFGASVRRKDDLYLIYLSLLVLS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00111 125 Pfam Cytochrome P450 29 102 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00111 125 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 30 119 - -
Cca06g00111 125 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 2 31 - -
Cca06g00111 125 PANTHER CYTOCHROME P450 71B11-RELATED 30 119 - -
Cca06g00111 125 PANTHER CYTOCHROME P450 71B11-RELATED 2 31 - -
Cca06g00111 125 SUPERFAMILY Cytochrome P450 9 118 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00111 125 Gene3D Cytochrome P450 3 117 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00111 Cca-Chr6 2740727 2741230 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00111 10 121 Cytochrome P450 AT3G26330 37.821 5.27e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00111 - - gmx:100801936 184.496