Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00107 ATGATCAATCATCTTACTGTCATGGATTCTAAAATACTTTATTTATTGACTCTTATCATGCCCTTTTTCCTTCTCATCATTGTAACACTGAAAATAAGGAGGAATGTTAAGAAAACCGAGTCACCTCCAAACATACCAGGACCATGGAAGCTACCTATTGTAGGAAATATACCTCATCTAGTTACATCAACACCACATAGAAAACTAAGAGATTTGGCCAAAATATATGGACCATTAATGCATCTGCAACTTGGGGAGATCTTCGCAATCATAGTTTCTTCTGCAGAATATGCTGAGGAGATAATGAAAACCCATGATTTGAACTTTTCGTCAAGGCCCCGCATGCTACTTACAGATATAGCATCTTATGGTTACACAAATATTGCTTTTTCACCTTATGGAAATTATTGGAGACAGGTACGAAAAATATGCACAGTAAAGTTTTTGTCCCAAAAACGTGTCAACTCATTTCAACCACTAAGAGAAGAAGAGTTCATCAATCTTGTTAAGACAGTTGCTTCACATAATGGGACCCCCGTCAACTTCACAGAAACTGTATCTTCATCAATATATAATATCATATCAAGAACTACGTTTGGCACAAAATGCAAAGACCAAGAAGAACTCATATTGTTTTTAAAAGAAGCAGTGCCAGTTGCAGCAGGATTGACCATAGGAGATTTGTTTCCTTCTGCTAAATGTCTTCAATTTGTTACTGGTTTAAGGCCAAAGATTTGGAGGCTGCAACGAGGAATTGAACGGATACTCGAAAACATCATCAATGAACACAAAGAAGCTAAGTCAAAAGCCAAAGAAGAGCATGAAGATTTGGTAGATATCCTCCTAAAATTCCACGATGGTAATGATAATAACCAGGACATTTTCTTAACTGTTAACAATATCAAGGCTATTATACAGGATATCTTTGGCGCTGGAGGTGAAACGTCATCAAATGCCATAAATTGGGCAATGGTAGAGATGGTAAAGGATCCAAAAGTAATGAAGAAAGCACAAGTTGAAGTGAGAAAGGTATTCGATAGAAAAGGAAGGGTAGATGAAAGTTGCATTGATGAGCTCAAATATTTGAAATCAATTGTCATGGAGACCTTAAGGTTACATCCCCCAGCTCCTCTTTTACTTCCAAGAGAAAATGGACAAGCATGTGAGATACGTGGGTATCATGTACCAGTCAAAAGTAAGGTAATTATCAATGCATGGGCAATTGGAAGAGATCCAAACTATTGGATTGAACCAGAAAAATTTTATCCAGAGAGATTTATTGATAGGTCTATGGACTACAAAGGGAGTAATTTTGAATACATTCCATTTGGTGCTGGAAGAAGAATATGCCCAGGCATCACCTTTGCTTCAGTAAATATTGAACTGGCCCTTGCCTTCTTGTTGTATCATTTTGATTGGAAGCTTCCAAATGGAATGGAAAGTGAGGACTTGGACATGACTGAGGAATTTGGAGCAGCTGTCAGAAGAAAGGATGACCTATACTTGATACCCATCACTTCTCGTCCTTTACTGGGAACAAGTGGATAG 1548 0.3773 MINHLTVMDSKILYLLTLIMPFFLLIIVTLKIRRNVKKTESPPNIPGPWKLPIVGNIPHLVTSTPHRKLRDLAKIYGPLMHLQLGEIFAIIVSSAEYAEEIMKTHDLNFSSRPRMLLTDIASYGYTNIAFSPYGNYWRQVRKICTVKFLSQKRVNSFQPLREEEFINLVKTVASHNGTPVNFTETVSSSIYNIISRTTFGTKCKDQEELILFLKEAVPVAAGLTIGDLFPSAKCLQFVTGLRPKIWRLQRGIERILENIINEHKEAKSKAKEEHEDLVDILLKFHDGNDNNQDIFLTVNNIKAIIQDIFGAGGETSSNAINWAMVEMVKDPKVMKKAQVEVRKVFDRKGRVDESCIDELKYLKSIVMETLRLHPPAPLLLPRENGQACEIRGYHVPVKSKVIINAWAIGRDPNYWIEPEKFYPERFIDRSMDYKGSNFEYIPFGAGRRICPGITFASVNIELALAFLLYHFDWKLPNGMESEDLDMTEEFGAAVRRKDDLYLIPITSRPLLGTSG 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00107 515 PANTHER CYTOCHROME P450 71B11-RELATED 17 508 - -
Cca06g00107 515 Gene3D Cytochrome P450 35 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00107 515 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 17 508 - -
Cca06g00107 515 Pfam Cytochrome P450 46 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00107 515 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00107 515 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00107 515 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00107 515 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00107 515 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00107 515 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00107 515 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00107 515 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00107 515 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00107 515 Coils Coil 253 280 - -
Cca06g00107 515 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00107 515 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00107 515 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00107 515 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00107 515 SUPERFAMILY Cytochrome P450 45 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00107 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00107 Cca-Chr6 2600500 2604442 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00107 13 504 Cytochrome P450 AT3G26300 40.594 2.07e-131 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00107 - - gmx:100801936 752.281