Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00105 ATGACCTCTCCAATGCTTGACTTATTAGCCCTCATCACTTTTTCTCTCTTGATAATTGTGACACTAAATATAGTGAGGAATCATAAGAAAACAGATCAACCAACTCAAAATATACCTCCAGGACCATGGAAGCTACCGATTATAGGAAATATACCTCATATTCTTACATCTGCACCCCATAAAAGATTGAGAGACCTAGCCAAAATATATGGTCCTTTGATGCATCTGCAACTTGGAGATAAGAGCACAATCATTGTTTCCTCGGCCGAGTATGCTAGAGAGATAATGAAAACTCATGATGTTATCTTTGCATCAAGGCCTCGTAGTGCAACTTCAGATATATTGTCCTATGAAGCCACAGGTATTGCTTCTGCACCTTATGGAAATTATTGGAGAGTGTTACGAAAGATATGCACAATGGAGCTTTTGTCCCCAAAACGTGTCGATTCATTTCAGCCAATAAGGGAATTAGAAGAGCTCACCAGTCTCATCAAAATGATTGATTCTCATAAAGGATCTCCCATCAACCTCACTCATGTAGTACTTTCATCGATATATTCTATCATTTCAAGAGCTGCTTTTGGCAAGAAGTATGGTAAAGAGCAAGAAGAATTCATATCATTGATGAAAGAAGGACTTACGATATTGGGAGATTTATTTCCTTCTACTAGATGGCTTTCAGTTGTCACCGGTTTGAGGCCTAAGCTTGAGAGGTTGCATCGACAAGTTGATCAGATTCTAGAAAACATCATCATTGAACATAAAATGGCAAAGTCAAAAGTCAGGAAAGGTCAAGATGAAGGAAAGGAAGATTTGGTAGATATTCTCCTAAAATTCCAGGATGGTAATGATAGTAACAATCATATTTGCTTAACTAATAAGCATGTCAAGGCTACAATCCTGGAAATCTTTGGTGCCGGGGCTGAGCCATCAGCAATTACCATAGATTGGGCTACGGCTGAGATGGTAAAAGATCCTAGAGTGATGAAGAAAGCACAAGCTGAAGCGAGAAAGGTATTCAATATGAAAGGAAGGGTTGACGGAACATGTATCAATGAACTTAAATATTTGAAATTGGTTGTTAAAGAGACCCTAAGATTACACCCTCCTGGTCCTCTTTTACTTCCAAGAGAATGTAGACAAGCATGTAAGATTCATGGCTATCTCATACCATTCGGAAGTATTGTCATAGTCAATGCTTGGGCAATTGGAAGAGATCCAAACTATTGGACAGAACCGGAGAGATTTTATCCAGAGAGATTCATTGATAGCTCTATTGATCATAGTGGGAACAGTTTTGAGTACATTCCATTTGGTGCTGGAAGAAGACTATGCCCAGGCAGCAACTTTGGTTTGATGAATGTTGAGCTAACACTTGCGTTGTTATTGTATCACTTTGATTGGAAGCTTCCCAATGGAATGAAAAATGAGGACTTGGACATGACCGAGGAATTTAAGGTAACTATTAGAAGAAAAGAAGACCTGTACTTGATTCCTGTATCTTCTTCTTTTGGATAA 1518 0.3867 MTSPMLDLLALITFSLLIIVTLNIVRNHKKTDQPTQNIPPGPWKLPIIGNIPHILTSAPHKRLRDLAKIYGPLMHLQLGDKSTIIVSSAEYAREIMKTHDVIFASRPRSATSDILSYEATGIASAPYGNYWRVLRKICTMELLSPKRVDSFQPIRELEELTSLIKMIDSHKGSPINLTHVVLSSIYSIISRAAFGKKYGKEQEEFISLMKEGLTILGDLFPSTRWLSVVTGLRPKLERLHRQVDQILENIIIEHKMAKSKVRKGQDEGKEDLVDILLKFQDGNDSNNHICLTNKHVKATILEIFGAGAEPSAITIDWATAEMVKDPRVMKKAQAEARKVFNMKGRVDGTCINELKYLKLVVKETLRLHPPGPLLLPRECRQACKIHGYLIPFGSIVIVNAWAIGRDPNYWTEPERFYPERFIDSSIDHSGNSFEYIPFGAGRRLCPGSNFGLMNVELTLALLLYHFDWKLPNGMKNEDLDMTEEFKVTIRRKEDLYLIPVSSSFG 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00105 505 Gene3D Cytochrome P450 29 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00105 505 Pfam Cytochrome P450 39 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00105 505 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00105 505 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00105 505 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00105 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00105 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00105 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00105 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00105 505 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00105 505 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00105 505 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 501 - -
Cca06g00105 505 PANTHER CYTOCHROME P450 71B11-RELATED 8 501 - -
Cca06g00105 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00105 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00105 505 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00105 505 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00105 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Cca06g00105 505 SUPERFAMILY Cytochrome P450 39 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00105 Cca-Chr6 2553823 2555739 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00105 8 500 Cytochrome P450 AT3G26300 43.222 1.98e-130 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00105 - - gmx:100818520 774.237