Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00098 ATGCTTGACTTATTAGCCCTCATCACTTTTTCTCTCTTGATAATTGTGACACTAAATATAGTGAGGAATCATAAGAAAACAGATCAACCAACTCAAAATATACCTCCAGGACCATGGAAGCTACCGATTATAGGAAATATACCTCATATTCTTACATCTGCACCCCATAAAAGATTGAGAGACCTAGCCAAAATATATGGTCCTTTGATGCATCTGCAACTTGGAGATAAGAGCACAATCATTGTTTCCTCGGCCGAGTATGCTAGAGAGATAATGAAAACTCATGATGTTATCTTTGCATCAAGGCCTCGTAGTGCAACTTCAGATATATTGTCCTATGAAGCCACAGGTATTGCTTCTGCACCTTATGGAAATTATTGGAGAGTGTTACGAAAGATATGCACAATGGAGCTTTTGTCCCCAAAACGTGTCGATTCATTTCAGCCAATAAGGGAATTAGAAGAGCTCACCAGTCTCATCAAAATGATTGATTCTCATAAAGGATCTCCCATCAACCTCACTCATGTAGTACTTTCATCGATATATTCTATCATTTCAAGAGCTGCTTTTGGCAAGAAGTATGGTAAAGAGCAAGAAGAATTCATATCATTGATGAAAGAAGGACTTACGATATTGGGAGATTTATTTCCTTCTACTAGATGGCTTTCAGTTGTCACCGGTTTGAGGCCTAAGCTTGAGAGGTTGCATCGACAAGTTGATCAGATTCTAGAAAACATCATCATTGAACATAAAATGGCAAAGTCAAAAGTCAGGAAAGGTCAAGATGAAGGAAAGGAAGATTTGGTAGATATTCTCCTAAAATTCCAGGATGGTAATGATAGTAACAATCATATTTGCTTAACTAATAAGCATGTCAAGGCTACAATCCTGGAAATCTTTGGTGCCGGGGCTGAGCCATCAGCAATTACCATAGATTGGGCTACGGCTGAGATGGTAAAAGATCCTAGAGTGATGAAGAAAGCACAAGCTGAAGCGAGAAAGGTATTCAATATGAAAGGAAGGGTTGACGGAACATGTATCAATGAACTTAAATATTTGAAATTGGTTGTTAAAGAGACCCTAAGATTACACCCTCCTGGTCCTCTTTTACTTCCAAGAGAATGTAGACAAGCATGTAAGATTCATGGCTATCTCATACCATTCGGAAGTATTGTCATAGTCAATGCTTGGGCAATTGGAAGAGATCCAAACTATTGGACAGAACCGGAGAGATTTTATCCAGAGAGATTCATTGATAGCTCTATTGATCATAGTGGGAACAGTTTTGAGTACATTCCATTTGGTGCTGGAAGAAGACTATGCCCAGGCAGCAACTTTGGTTTGATGAATGTTGAGCTAACACTTGCGTTGTTATTGTATCACTTTGATTGGAAGCTTCCCAATGGAATGAAAAATGAGGACTTGGACATGACCGAGGAATTTAAGGTAACTATTAGAAGAAAAGAAGACCTGTACTTGATTCCTGTATCTTCTTCTTTTGGATAA 1506 0.3858 MLDLLALITFSLLIIVTLNIVRNHKKTDQPTQNIPPGPWKLPIIGNIPHILTSAPHKRLRDLAKIYGPLMHLQLGDKSTIIVSSAEYAREIMKTHDVIFASRPRSATSDILSYEATGIASAPYGNYWRVLRKICTMELLSPKRVDSFQPIRELEELTSLIKMIDSHKGSPINLTHVVLSSIYSIISRAAFGKKYGKEQEEFISLMKEGLTILGDLFPSTRWLSVVTGLRPKLERLHRQVDQILENIIIEHKMAKSKVRKGQDEGKEDLVDILLKFQDGNDSNNHICLTNKHVKATILEIFGAGAEPSAITIDWATAEMVKDPRVMKKAQAEARKVFNMKGRVDGTCINELKYLKLVVKETLRLHPPGPLLLPRECRQACKIHGYLIPFGSIVIVNAWAIGRDPNYWTEPERFYPERFIDSSIDHSGNSFEYIPFGAGRRLCPGSNFGLMNVELTLALLLYHFDWKLPNGMKNEDLDMTEEFKVTIRRKEDLYLIPVSSSFG 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00098 501 Pfam Cytochrome P450 35 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00098 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Cca06g00098 501 Gene3D Cytochrome P450 25 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00098 501 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00098 501 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00098 501 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00098 501 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00098 501 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00098 501 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00098 501 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00098 501 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00098 501 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00098 501 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00098 501 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00098 501 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00098 501 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00098 501 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 6 497 - -
Cca06g00098 501 PANTHER CYTOCHROME P450 71B11-RELATED 6 497 - -
Cca06g00098 501 SUPERFAMILY Cytochrome P450 35 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00098 Cca-Chr6 2363561 2365465 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00098 4 496 Cytochrome P450 AT3G26300 43.222 2.81e-130 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00098 - - gmx:100818520 774.237