Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00095 ATGGAATTTTCTTACCAAGGAATTGAATTAGATTCATTTGAACTAATATTCCTGGGAAGATACGCTTATTTCAAATCATGGAGAACATGGATATCACCAGAGTTGATATCCGTGTCCCCTTTGGCAATTGTTAGTGGACAAGAAACCTCTATCTCATTGAAGGGTAGAAACCTGTCAACTCCTGGCACAAAGATTCATTGCGCAGGTACTGGGTCATACACATCAGCAGAAGTCTTATAG 240 0.3958 MEFSYQGIELDSFELIFLGRYAYFKSWRTWISPELISVSPLAIVSGQETSISLKGRNLSTPGTKIHCAGTGSYTSAEVL 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00095 79 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 14 19 79 - -
Cca06g00095 79 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 19 79 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00095 Cca-Chr6 2319783 2320107 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00095 19 78 SBP-box Gene Family AT1G20980 55.000 5.26e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00095 - - gmx:100812180 103.605