Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00085 ATGGCGGGCGGCAATGGCAACAGTAACACCATCCCCGTGGCCCCTAAATCTCTCATTTTCTTACAAGAATGGTGGCTTGTGAAGCAGCGCAAGGGTTTAGCCGTGGGCGGGGTTGCTTCCGTGAAGAGAGATAGAGAAAGTTTGTTTTTGTCTACACTGATTGCTGAGAGAGAAGAGGCCAATGTCCTCCACACCCAGGATGGCATCACTCTTATTTTCCGCGGTTGCATCAACACCTCCCGTTCATCGCAAAACGGTGTCCCTGCCGAGGTATGTCAACACTTCTTGGTTGGATTCCCACACGATTGGAAAAAGTATTCAGTTCATATGGATGAGGTTTATGCATTTGGTGACTCAAGTGCTTGTTCAAAGAAGAGGGATGGTGATGCTTTGCCATTTTCTACTCGTGATGATGATTTCACCGAGAGACACAATTCTATTTCTTTTGGAAATGATTCCAATCAATCTGAATCAACTGATAACCACAATACAGCAGTGTTCCAGCTGCAGGTTGACATGTGCAATGGTGAAAAAGGAATATCACACATTGCTGTTGAAAGCCAGGCTGAACATTCAAAAAATGGCCAATCCTTGATGGGTATGTATGATTCTAACACATGTATAGGCCCTTCTGGTACAAAGAAAATGAAAAGAGGCCGGTTCTCGGGTGAGCGCAAGGAGAACTCCTGTAGTAGGATGGTGACGAGAAGCATTTCCAAAAAATATCGCACAATGTCCGAGCAAGATGAGAAAGCTACAGTAGCAAGTGGTATTTCTCCCGTTAGAAGATCTCCAATGCCAAATATTTATAGATAA 816 0.4449 MAGGNGNSNTIPVAPKSLIFLQEWWLVKQRKGLAVGGVASVKRDRESLFLSTLIAEREEANVLHTQDGITLIFRGCINTSRSSQNGVPAEVCQHFLVGFPHDWKKYSVHMDEVYAFGDSSACSKKRDGDALPFSTRDDDFTERHNSISFGNDSNQSESTDNHNTAVFQLQVDMCNGEKGISHIAVESQAEHSKNGQSLMGMYDSNTCIGPSGTKKMKRGRFSGERKENSCSRMVTRSISKKYRTMSEQDEKATVASGISPVRRSPMPNIYR 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00085 271 PANTHER TRANSCRIPTION REGULATOR OTHERS FAMILY-RELATED 161 266 - -
Cca06g00085 271 PANTHER TRANSCRIPTION REGULATOR OTHERS FAMILY-RELATED 10 129 - -
Cca06g00085 271 MobiDBLite consensus disorder prediction 243 271 - -
Cca06g00085 271 PANTHER MIS18-BINDING PROTEIN 1 10 129 IPR039110 -
Cca06g00085 271 PANTHER MIS18-BINDING PROTEIN 1 161 266 IPR039110 -
Cca06g00085 271 Pfam SANTA (SANT Associated) 19 106 IPR015216 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Cca06g00085 SANTA 7.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00085 - - gmx:102668053 259.61