Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00050 ATGGGCACATTCACTTGCATACTCCTCTTTCTTTTAACCATCATCATTATGAAAGCCCTCACTTCACTGCTATTTCCAAATAGAAGCAAAACAAATGACAAGCTCCCACCAGGACCTATTGGTCTTCCCATAGTTGGAAATCTCCACCAACTAGGTGCCAAGCCCCACCAAACCTTGGCCTCTCTAGCAAACACTTATGGCCCAATAATGAGCCTCAAATTAGGCCAAATCACCACCATAGTGATGTCCTCAGTAGAAATGGCCAAAGAGGTTCTCCTAATCCATGACCAGTTCTTATCAAACAGAAAAATCCCTGATGCAATGAAAGGTGCTAACCATGATGAGTACGGCTTGCCCTTCATTCCAGTCTCACATCGCTGGAGAGACTTGAGAAAATTATGTAATGGCCTATTGTTTTCTAACAAGAACTTAGTTGCCAGTGAAGGGCTTAGGCGCAACAAGGTTAAGGAGCTTCTCAGTGACATCCACCAAAGCAGCTTGAGGGGTGAAGCAGTGGATATTGGAAGGTTGGCTTTTAAGACAACCATTAACTTGTTGTCAAACACGATTTACTCAAAGGATTTGGTTCACTCTACAAATAAGGCAGGAGAAATCAAGGAGTTAGTGGCAAATATCATGAAGGAGGTTGGAAGGCCAAATTTGGCAGATTGTTTCCCAGTGTTGAAGGTGGTTGACCCTCATGGCATCAGAAGGCGCACGGGTAATTACTTTTGGAAGTTGTTGACCATATTCAAGAGCTTGGTTGACCAAAGGTTGAAGCAAAGGAAAGATGCTACTTACTGCACCAAAAATGACATGTTAGATGCTATTCTCAACAATGGTCAAGACAACAATCAAGAAATGTATAAGGATAAGATTGAACGTTTGTCAGTGGACTTGTTTGTGGCAGGAACAGATACGATAACATCTACAGTAGAATGGGCAATGGCTGAGTTACTTCATAACCCGAATATCATGGCAAAGGCAAAGGCAGAGCTATATAGGAGTATAGGCAAAGGTAAGGTTGTGGAAGAATCAGACATTGGTAAACTCCCTTACTTGCAAGCAATAGTGAAAGAGACTTTCAGGTTGCACCCAGCAGCTCCACTTTTGCTACCTAGACAAGTTGAAGTGGAGTTGAAGATGCATGGATACACAATCCCAAAGGGCGCACAAGTGTTAGTTAATGTGTGGGCCATTGGTAGAGACCCAAATTTATGGGACAATCCTTGTTTGTTTTCACCAGAGAGGTTCTTGGGGTCAGAAATTGACTTTAGAGGAAGGAGTTTTGAGCTCACACCATTTGGTGGTGGGAGGAGAATATGCCCTGGCTTGCCATTGGCCATAAGATTGTTGTTCTTAATGTTGGGTTCACTTATCAATTCCTTTGATTGGGAGCTTCAGGGTGGTGTCAAACCACATGATATGAATATGGATGACAAGTTTGGACTAACCTTAGAGAAGGCTCAACCTGTGCTAGTTGTTCCGATTAAAACAACCAATTAA 1506 0.427 MGTFTCILLFLLTIIIMKALTSLLFPNRSKTNDKLPPGPIGLPIVGNLHQLGAKPHQTLASLANTYGPIMSLKLGQITTIVMSSVEMAKEVLLIHDQFLSNRKIPDAMKGANHDEYGLPFIPVSHRWRDLRKLCNGLLFSNKNLVASEGLRRNKVKELLSDIHQSSLRGEAVDIGRLAFKTTINLLSNTIYSKDLVHSTNKAGEIKELVANIMKEVGRPNLADCFPVLKVVDPHGIRRRTGNYFWKLLTIFKSLVDQRLKQRKDATYCTKNDMLDAILNNGQDNNQEMYKDKIERLSVDLFVAGTDTITSTVEWAMAELLHNPNIMAKAKAELYRSIGKGKVVEESDIGKLPYLQAIVKETFRLHPAAPLLLPRQVEVELKMHGYTIPKGAQVLVNVWAIGRDPNLWDNPCLFSPERFLGSEIDFRGRSFELTPFGGGRRICPGLPLAIRLLFLMLGSLINSFDWELQGGVKPHDMNMDDKFGLTLEKAQPVLVVPIKTTN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00050 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Cca06g00050 501 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00050 501 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00050 501 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00050 501 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00050 501 Pfam Cytochrome P450 36 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00050 501 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 499 - -
Cca06g00050 501 SUPERFAMILY Cytochrome P450 36 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00050 501 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00050 501 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00050 501 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00050 501 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00050 501 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00050 501 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00050 501 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g00050 501 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 499 - -
Cca06g00050 501 Gene3D Cytochrome P450 24 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00050 Cca-Chr6 1134091 1135964 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00050 35 498 Cytochrome P450 AT2G45550 48.401 6.27e-166 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00050 - - lja:Lj2g3v0039250.1 685.641