Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00029 ATGTCCAGCGCAGAAGGAGGAGGAGCCACTGCCAACCACGCCGCCCCGCCTCTCAAGAAGCCGCCCTCCAAGGACCGCCACAGCAAGGTCGACGGCCGCGGCCGCCGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCCTCTGGGCCCTCCCTCCCCGCCCCGACTTCGCCCAGGTCTGGAGCTTcgccgccgccgccgccgccgctcagcctgagctcgtctccgtctcgccgccagcctccATGTTTCACCATCAACACCTCCAGCAGCAACAAGCCGCCATGGGAGAGGCTTCCGCCGCCAGGCTCGGGAATTACCTTCCCGGCCACCTCAATTTGCTCGCCTCCTTGTCCGGCGGCCACGGGAACTCCGGCCGGCGAGACGACGAGCCTCGTTGA 615 0.3463 MSSAEGGGATANHAAPPLKKPPSKDRHSKVDGRGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALWALPPRPDFAQVWSFAAAAAAAQPELVSVSPPASMFHHQHLQQQQAAMGEASAARLGNYLPGHLNLLASLSGGHGNSGRRDDEPR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00029 204 MobiDBLite consensus disorder prediction 1 40 - -
Cca06g00029 204 MobiDBLite consensus disorder prediction 19 34 - -
Cca06g00029 204 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 117 201 - -
Cca06g00029 204 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 16 37 - -
Cca06g00029 204 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 117 201 IPR005333 GO:0003700
Cca06g00029 204 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 16 37 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00029 Cca-Chr6 750851 752420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00029 119 204 TCP Transcription Factor Family AT5G23280 60.000 1.72e-21 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00029 K16221 - ccaj:109818628 166.392