Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00027 ATGGTGACGCTTTCAGGAGCGCATTCAATTGGTGTGTCGCGTTGCTCTTCCTTCTCAAACCGCTTGTACTCCTTCAACCACACGTTCCAACAAGACCCTTCCATGGATGCTTCATATGCTGCAACGTTGAAAGCCACGTGTCCTGCACCACCCCCCACGTCGGACCCAATAGTGGCTCTTGACCCTTCCACGCCGATTCGGCTGGACAACAAATACTATGAGGGGTTGATGAACCACCGTGGCTTGTTGACATCGGATCAAACGTTGTACACCAGCCACTCCACCAAGGTAATGGTTCAAAACAATGCGTACAATGGTGCAACTTGGGCTCAGAAGTTTGCCCTAGCAATGGTGCGCATGGGTTCCATTGAAGTGCTCACTGGCTCCGATGAACAATATCAACGCCGCACCAGTCACTGCCGCAACGCAGCCAGCTCCAGCCACCCTCTCACACCACACCGCACCACAGTTGCCACCGAACCACAACTACGACGCGTCGCACCACAACTATCAAGCACCATCGCGTGCGTTGTGAGCCACTGCGTGCATCGTGAGCCACCGCGCACACCGCGAGCCATCGCGCGCACCATCGCGCCCACCGCAAGCCACCGCGCACGTCACCACCCCGGGCCACCTCGCACCGTGCACATCGTTTGGGGGCCACCCACCATCGCTGTCCTGGCACGACTGCTTGTGCCACGCATCACCCTGGGACACTCACAGTCTTGCACTACCGCGCAGCGCACCACCCCGGCATATTACATTTTTTTTTAA 774 0.5724 MVTLSGAHSIGVSRCSSFSNRLYSFNHTFQQDPSMDASYAATLKATCPAPPPTSDPIVALDPSTPIRLDNKYYEGLMNHRGLLTSDQTLYTSHSTKVMVQNNAYNGATWAQKFALAMVRMGSIEVLTGSDEQYQRRTSHCRNAASSSHPLTPHRTTVATEPQLRRVAPQLSSTIACVVSHCVHREPPRTPRAIARTIAPTASHRARHHPGPPRTVHIVWGPPTIAVLARLLVPRITLGHSQSCTTAQRTTPAYYIFF 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00027 257 ProSiteProfiles Plant heme peroxidase family profile. 1 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g00027 257 Gene3D Peroxidase, domain 2 1 120 - -
Cca06g00027 257 SUPERFAMILY Heme-dependent peroxidases 1 137 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca06g00027 257 PANTHER PEROXIDASE 1 132 - -
Cca06g00027 257 PANTHER PEROXIDASE 25-RELATED 1 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00027 257 PRINTS Plant peroxidase signature 115 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00027 257 PRINTS Plant peroxidase signature 75 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00027 257 PRINTS Plant peroxidase signature 59 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00027 257 Pfam Peroxidase 1 103 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g00027 257 Gene3D - 121 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00027 Cca-Chr6 736714 738468 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00027 1 135 Peroxidase AT4G37520 41.606 2.34e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00027 K00430 - gmx:100796311 219.935