Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00026 ATGGATAACACTCCACCTCCATGCATGCTTCAAATGGTTTCACGCCTGGTTCTAATTCTATGTATGTCAGCATTGGCCTCAGCATCTCTGAAAGTGGGTTTCTATAGCTCCACATGTCCATCTGCTGAGACAATAGTGAGAAACACAGTGAACAAAGCAGTTTCTGATAACCCAGGCGTAGCTGCTGGTCTCATTAGAATGCATTTCCATGATTGCTTTGTCAGGGGTTGTGATGGTTCAGTGCTACTAGCATCCACGCCAGGAAACCCAATAGCTGAGAGAGACCACTTCGTCAACAACCCAAGCCTACGCGGCTTCGAGGTGATTGAGGATGCCAAGACCCAAATAGAAGCTGCATGTCCTCAAACGGTGTCGTGTGCAGACATATTGGCCTTCGCAGCACGAGACAGTGTGGTGAAAGTTGGTGGCACAAACTACGAAGTCCCATCAGGACGCAGAGACGGTCGTGTCTCAATCGGTGACGAAGTGATACAGCATCTTCCTGGACCACGCTCCAGTGCCGATGAACTCGTTAGTAATTTCTCCAAAAAGGGTTTGTCAGCAGATGAAATGGTGACGCTTTCAGGAGCGCATTCAATTGGTGTGTCGCGTTGCTCTTCCTTCTCAAACCGCTTGTACTCCTTCAACCACACGCTCCAGTGCCGATGA 669 0.4918 MDNTPPPCMLQMVSRLVLILCMSALASASLKVGFYSSTCPSAETIVRNTVNKAVSDNPGVAAGLIRMHFHDCFVRGCDGSVLLASTPGNPIAERDHFVNNPSLRGFEVIEDAKTQIEAACPQTVSCADILAFAARDSVVKVGGTNYEVPSGRRDGRVSIGDEVIQHLPGPRSSADELVSNFSKKGLSADEMVTLSGAHSIGVSRCSSFSNRLYSFNHTLQCR 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00026 222 PANTHER PEROXIDASE 20 220 - -
Cca06g00026 222 Gene3D Peroxidase, domain 2 168 218 - -
Cca06g00026 222 CDD secretory_peroxidase 30 218 IPR033905 GO:0004601|GO:0042744
Cca06g00026 222 SUPERFAMILY Heme-dependent peroxidases 30 214 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca06g00026 222 Pfam Peroxidase 46 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g00026 222 PANTHER PEROXIDASE 25-RELATED 20 220 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00026 222 ProSiteProfiles Plant heme peroxidase family profile. 29 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g00026 222 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Cca06g00026 222 Gene3D - 33 167 - -
Cca06g00026 222 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00026 222 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00026 222 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00026 222 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00026 222 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00026 222 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g00026 222 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g00026 222 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g00026 222 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g00026 222 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g00026 222 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00026 Cca-Chr6 735278 736670 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00026 16 215 Peroxidase AT4G11290 49.754 8.21e-69 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g00026 K00430 - gmx:100815350 366.696