Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g02145 ATGGGTTGTTGCCAATCATCGATGTGGCTgagagcgagggagagggagactcaccctgaaaaggaaaaggaaagggaaagggaaagggaaaaggaaaaagagcaagcgtacggtaaccaccagagggcatcggagggagagggagagggagagaaagaaggCTTCGATTTCTCCTTCTCCGAGTTCTACTTAGCGGACCTCAAGGCGGCCACCAACAATTTCAGCTCCGACTATATCGTGTCGGAGAGTGGGGAAAAAGCACCCAACCTCGTCTACAAAGGTCGTCTGCAGAACCAGAGCCGTTGGATTGCGGTCAAGAAGTTCAGCAAGGCCGCCTGGCCCGATCCCAAGCAATTCGTCGAAGAGGCTTCCGGCGTCGGCAAGTTGCGCCACCCTCGCCTCGCTAATTTAATCGGCTACTGCTGCGACGGCGACGAGAGGCTCCTCGTCGCCGAGTACATGCCTAATGACACTCTCGCCAAGCATCTCTTCCACTGGGAAACTCAGACCATTGAGTGGGCCATGCGCTTGCGTGTCGCTCTCTATATCGCTCAGGCTTTGCATTACTGTAGCTCCGAGGGACGGCCCTTGTACCACGACTTGAATGCATACCGTGTTCTCTTCGACCACGAAGGTGATCCCCGCCTCTCCTGTTTTGGTTTCATGAAGAACAGCAGAGATGGCAAGAGTTACAGCACCAATCTTGCATACACGCCTCCTGAATATTTAAGAAACGGAAGGGTCACCCCGGAAAGTGTCATTTACAGCTTCGGAACCGTTCTTCTAGACCTCCTCAGTGGCAAGCACATCCCTCCTAGTCATGGGAAAAACAATATGCTCTTAATGGATTCACATTTGGAGGGAAAGTTTTCAACAGAAGAGGCAACAGTAGTTGTTAATCTCGCCTCTAAATGTTTGCAATATGAACCAAGGGAGCGGCCTGATACAAAGGATTTGGTCACAACACTCGCCCCATTGCATACAAAACCCGATGTTCCTTCGCACATCATGCTTGTAATTCCAAAGCAGGAGGAAGCTCCATCAACCCCACAGCGCCCTCTTTCGGCAATGGGTGAGGCATGTTCAAGAATGGACCTAACAGCCATACATCAGATCTTGGTTGCGACACACTACAGAGACGATGAAGGAACTAACGAGTTGTCGTTCCAAGAGTGGACTCAACAGATGAGAGATATGCTGGAGGCAAGGAAGCGTGGAGACTATGCATTCCGTGACAAAGACTTTAAGACAGCCATTGATAATTATTCCCAGTTTATTGATGTTGGAACGATGGTCTCCCCAACTGTTTTTGCAAGGCGCAGTCTATGCTATCTGTTATGTGATCAACCAGATCCTGCGCTGAGAGATGCAATGCAAGCACAGTGTGTTTATCCAGACTGGCCCACGGCTTTCTACATGCAATCGGTTGCTCTTGCCAAGCTGGACATGCACAAGGATGCGGCTGATATGTTAAATGAAGCAGCTGCGTTGGAAGAGAAGAGGCAACGAGGAGCGAGAGGATCATAG 1527 0.4578 MGCCQSSMWLRARERETHPEKEKEREREREKEKEQAYGNHQRASEGEGEGEKEGFDFSFSEFYLADLKAATNNFSSDYIVSESGEKAPNLVYKGRLQNQSRWIAVKKFSKAAWPDPKQFVEEASGVGKLRHPRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWETQTIEWAMRLRVALYIAQALHYCSSEGRPLYHDLNAYRVLFDHEGDPRLSCFGFMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHGKNNMLLMDSHLEGKFSTEEATVVVNLASKCLQYEPRERPDTKDLVTTLAPLHTKPDVPSHIMLVIPKQEEAPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMHKDAADMLNEAAALEEKRQRGARGS 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g02145 508 MobiDBLite consensus disorder prediction 1 52 - -
Cca05g02145 508 SUPERFAMILY Protein kinase-like (PK-like) 58 336 IPR011009 -
Cca05g02145 508 Gene3D Transferase(Phosphotransferase) domain 1 155 339 - -
Cca05g02145 508 SUPERFAMILY TPR-like 400 501 IPR011990 GO:0005515
Cca05g02145 508 MobiDBLite consensus disorder prediction 11 52 - -
Cca05g02145 508 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 1 506 - -
Cca05g02145 508 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 506 IPR045845 GO:0004672|GO:0009742
Cca05g02145 508 ProSiteProfiles Protein kinase domain profile. 77 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g02145 508 Pfam Protein tyrosine and serine/threonine kinase 91 323 IPR001245 GO:0004672|GO:0006468
Cca05g02145 508 Gene3D Tetratricopeptide repeat domain 397 506 IPR011990 GO:0005515
Cca05g02145 508 Gene3D Phosphorylase Kinase; domain 1 50 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g02145 Cca-Chr5 41091426 41099496 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g02145 16 331 Glycoside Hydrolase AT3G07070 33.333 2.19e-46 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Cca05g02145 PK_Tyr_Ser-Thr 3.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g02145 K14500 - gmx:100808907 938.332