Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g02139 ATGAACAAAATTCAGACACATTCTGGGCGTCACTTTACACTGATTTTGTTTTTTGTGGTTCTTCTGCCTTGTTTGGTTGTTGGCGATTGTACATGTGAGAAAGAAGATGATACTGGTGACAAGGGTTTAGCTGAGAAATACAAAGTAGCTGCACTTGTTTCGATTTTGTTTGCAAGTGCAATTGGTGTTACCCTTCCAATGCTGGGCAAAACTTTCCCTGCATTGCATCCGGAGAAGGACTTGTTCTTCATCGTGAAGGCCTTTGCAGCGGGGGTTATATTGTCCACTGGTTTCATCCATGTTTTGCCTGATGCCTTCGAAAAGTTAACATCTCCTTGTCTCAGTGATCATCCCTGGGGCGATTTCCCCTTCGCGGGATTTGTGGCAATGTTAGCAGCTATCGGAACGCTTATGATTGATTCTCTTGCAACTGCATATTTTAAAAAGTCTAGTGTTAGCGAGAAGGATGCTGTTGTTGACGAAGAAGAGCAGGTAGGGGGGCATGACATGCACGTACATACCCATGCAACTCATGGTCATGCTCATGGTTCCATTCCTTCTCCTTCAACAGACCTCCTTCGCCATCGTGTTATTTCTCAGGTGTTGGAGTTGGGGATTGTGGTGCATTCTGTGATAATAGGGATCTCTCTGGGTGCATCTGAAAGTCCTGACACGATAAGGCCTCTTATTGCTGCTTTAACTTTCCACCAATTTTTTGAAGGCATGGGTCTCGGTGGTTGCATCTCACAGGTATCGTATATTTCACTCATTTATGTTTTCCCGTCTTTTTATTTATTCTTCTGCGGTCACTCATTTTGA 819 0.4396 MNKIQTHSGRHFTLILFFVVLLPCLVVGDCTCEKEDDTGDKGLAEKYKVAALVSILFASAIGVTLPMLGKTFPALHPEKDLFFIVKAFAAGVILSTGFIHVLPDAFEKLTSPCLSDHPWGDFPFAGFVAMLAAIGTLMIDSLATAYFKKSSVSEKDAVVDEEEQVGGHDMHVHTHATHGHAHGSIPSPSTDLLRHRVISQVLELGIVVHSVIIGISLGASESPDTIRPLIAALTFHQFFEGMGLGGCISQVSYISLIYVFPSFYLFFCGHSF 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g02139 272 Pfam ZIP Zinc transporter 47 252 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cca05g02139 272 PANTHER ZINC/IRON TRANSPORTER 19 257 - -
Cca05g02139 272 TIGRFAM zip: ZIP zinc/iron transport family 30 255 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cca05g02139 272 PANTHER ZINC TRANSPORTER 1 19 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g02139 Cca-Chr5 41048129 41050912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g02139 13 249 Inorganic Solute Cotransporters AT3G12750 58.065 1.93e-94 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g02139 K14709 - qsu:112037227 324.324