Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g02131 ATGGCTGCACAAGCTCTAGTATCTTCATCCTCTCTTACCTTCTCAGCCGAGGCTGCAAGACAGAGTCTTGGAGCAAGATCACCTCAAGGGTTCTCCAGAAAAGCCTCCTTTATTGTTAAGGCAGCTTCGACTCCCCCTGTCAAGCAAGGAGCAGACAGACCTTTGTGGTTTGCATCAAAGCAAAGTCTTTCTTACTTGGATGGCAGCCTACCAGGTGACTACGGATTTGACCCTCTAGGACTTTCAGACCCTGAAGGAACAGGAGGGTTCATCGAGCCAAAATGGCTAGCATATGGTGAAATCATCAACGGTCGGTACGCAATGTTGGGTGCAGTTGGTGCCATTGCACCTGAAATTCTTGGCAAAGCCGGTCTGATCCCACAGGAAACAGCACTCCCATGGTTCAAAACCGGTGTGATCCCACCTGCAGGAACATACAACTACTGGGCAGACTCCTACACACTCTTTGTGTTTGAGTTGGCGCTAATGGGGTTTGCAGAGCACAGAAGGTTCCAAGACTGGGCCAAACCTGGCTCTATGGGGAAACAATACTTCTTAGGACTAGAGAAGGGTCTTGGAGGTTCTGGTGAGCCAGCTTACCCTGGAGGACCCTTCTTTAACCCTCTTGGCTTTGGCAAGGATGAGAAGTCCTTGAAGGATTTGAAGCTGAAGGAAGTGAAGAATGGAAGGTTGGCTATGTTGGCAATATTGGGTTACTTTGTTCAGGCTCTCGTGACAGGGGAAGGACCATACCAAAACCTCCTAGATCACCTGGCTGACCCTGTGCACAACAACGTCTTGACCAGCCTCAAGTTCCACTGA 822 0.4976 MAAQALVSSSSLTFSAEAARQSLGARSPQGFSRKASFIVKAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETALPWFKTGVIPPAGTYNYWADSYTLFVFELALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTGEGPYQNLLDHLADPVHNNVLTSLKFH 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g02131 273 Pfam Chlorophyll A-B binding protein 64 243 IPR022796 -
Cca05g02131 273 Gene3D Chlorophyll a/b binding protein domain 55 272 - -
Cca05g02131 273 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 8, CHLOROPLASTIC 1 272 - -
Cca05g02131 273 SUPERFAMILY Chlorophyll a-b binding protein 52 269 - -
Cca05g02131 273 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 272 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g02131 Cca-Chr5 41007205 41009269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g02131 1 273 Chloroplast and Mitochondria Gene Families AT1G61520 84.672 5.84e-164 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g02131 K08909 - gmx:100784090 509.99