Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g02104 ATGTTTGAAGGTGTTCCACAGGGTGATGCCATGATGCTAAAGGCTATATGCCATAATTGGTCGGATGAAAAAGCCATAGAAATTTTAAGCAATTGTTACAAAGCTTTGCCAGCAAAGGGGAAGGTCATTGTTGAGGATTTCATACTGCAAGAAGATCCGGAACCTACAAATGATTATAAAGTGGTTTTAATTCTTGATAACATCATGTTTATTACACCTGGTGGAAGGGAAAGAACTGAGAAACAATTTGAGAGTTTGGGCAAGCGTTCTGGATTTTCTAGGTTTCAAGTTGTCTGTCGAGCTTTCTCTACTATGGCAGTGATGGAATTTTATAAGTAA 339 0.3805 MFEGVPQGDAMMLKAICHNWSDEKAIEILSNCYKALPAKGKVIVEDFILQEDPEPTNDYKVVLILDNIMFITPGGRERTEKQFESLGKRSGFSRFQVVCRAFSTMAVMEFYK 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g02104 112 Pfam O-methyltransferase domain 1 93 IPR001077 GO:0008171
Cca05g02104 112 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 112 - -
Cca05g02104 112 Gene3D Vaccinia Virus protein VP39 2 101 IPR029063 -
Cca05g02104 112 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 112 IPR016461 GO:0008168
Cca05g02104 112 PANTHER O-METHYLTRANSFERASE 1 112 IPR016461 GO:0008168
Cca05g02104 112 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 110 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g02104 Cca-Chr5 40787770 40788217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g02104 1 102 Monolignol Biosynthesis Gene Families AT5G54160 52.427 3.74e-32 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g02104 - - ccaj:109814328 230.335