Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g02059 ATGCCTCTCACCGGTGCCACTCTCCGGCCTCCGATCACGGTGTCGGCGGTGGATTTCCGGCGACCGGCGAGGCACTACGAGGTGCTCCGCATCAAGCACAACGCATCGTCGGTGGAAATAAAGGCGGCGTACCGGAACCTGGCGAAGGTGTACCACCCTGATTCGGCGGTGCGGCGGTCGGAATCCGACGAACGGGATTTCATTGAAATTCACGAAGCTTACGAAACGCTATCGGATCCGTCGGCGAGAGCGGTCTATGATTTGTCGTTGATGGCCGCGCACGGTGGCGGTGGGTCGTTATCTTCTTCGGTGGGTCCGAATGGCTCTTCCGGGTTGAACCGGACCCGGAAGTGGGAAACCGACCAATGCTGGTAG 375 0.6027 MPLTGATLRPPITVSAVDFRRPARHYEVLRIKHNASSVEIKAAYRNLAKVYHPDSAVRRSESDERDFIEIHEAYETLSDPSARAVYDLSLMAAHGGGGSLSSSVGPNGSSGLNRTRKWETDQCW 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g02059 124 SMART dnaj_3 23 82 IPR001623 -
Cca05g02059 124 MobiDBLite consensus disorder prediction 96 124 - -
Cca05g02059 124 ProSiteProfiles dnaJ domain profile. 24 90 IPR001623 -
Cca05g02059 124 SUPERFAMILY Chaperone J-domain 24 102 IPR036869 -
Cca05g02059 124 Gene3D DnaJ domain 18 103 IPR036869 -
Cca05g02059 124 CDD DnaJ 25 79 IPR001623 -
Cca05g02059 124 PRINTS DnaJ domain signature 26 44 IPR001623 -
Cca05g02059 124 PRINTS DnaJ domain signature 44 59 IPR001623 -
Cca05g02059 124 PRINTS DnaJ domain signature 62 82 IPR001623 -
Cca05g02059 124 ProSitePatterns Nt-dnaJ domain signature. 67 86 IPR018253 -
Cca05g02059 124 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 19 124 - -
Cca05g02059 124 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 19 124 - -
Cca05g02059 124 Pfam DnaJ domain 25 87 IPR001623 -
Cca05g02059 124 MobiDBLite consensus disorder prediction 100 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g02059 Cca-Chr5 40335930 40336663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g02059 25 87 C2H2 Transcription Factor Family AT1G74250 44.776 9.60e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g02059 - - ccaj:109809006 221.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g02059 05 40335930 40336663 Cca05g02059 05 40335930 40336663 ECH
Cca01g00772 01 10226999 10227644 Cca05g02059 05 40335930 40336663 PCT