Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g02006 ATGGAGCTCCACAACGACCCTCTTTCCATTTACCTCATCACCTTCTTTCTCTTTCTCTTAGTGTTGTTCAAACTATTTCAGAAACAGGATCCTAACACCAAATTGCCCCCAGGACCAAGAACCCTACCTCTCATTGGAAACATACACCAACTCGTTGGATCACTCACTCACCACCGCTTGAAAATTTTAGCCGACAAGTATGGTCCCTTAATGCACCTAAAACTAGGAGAGGTATCCAATATCATAGTCACGTCACGAGAAATGGCAGAAGAGATAATGAAAACACAAGATCTCAACTTTTCTGATAGGCCAAACCTTATATCATCGAGAATCGTGTCGTACGACGCCACCAGCATTTCATTCGCTCCGCACGGTGACTATTGGAGGCTGCTTCGAAAACTATGCACAGTGGAGCTCTTAACCACAAAACGCGTGCAATCGTTTCGGTTCATTAGAGAAGAAGAGGTTTCGGAGTTAATCAAAAAAGTATCTGCAAGCGAAGGGTGCGTTTTCAATCTCTCTGAGCATGTGTACCCCCTAATTTATGCGATTGCGGCACGTGCGCTGTTTGGGAAGAAAAGCAGGTACCAAGAAGTGTTCATAAAAACGATTAAGAAACAACTGAGTCTGATTGGAGGGTTCTCTGTGGCTGATTTGTATCCCTCCATTGGAGTGCTTCAAGTGAGGGCGAAGAGGAAAGTTGAAGAGGTCCATAGAGAGGTTGATAAGGTTTTGCAAGACATCATCGACGAGCACAAGAATAGGAAAAGCGAACAACGTGAAACGGTGGAAGATCTTGTCGATGTTCTTCTCAGGTTTCAATCGGAATATCCTTTGACTGAGGACAACCTTAAAGCCGTCATCCAGGACATGTTTATCGGTGGTGGTGAAACAGCAGCTTCTACTGTGGAATGGACAATGTCAGAAATGATAAAGAACCCTAATGTGATGGAAAAAGCACAAGCTGAGGTTAGAAAGGTGTTTGGTAGCAAAGGGTACGTGGATGAGGCAGAATTGCACCAATTGGTATACCTAAAGTCTGTCATCAAAGAAACCATGAGGTTACACCCACCAGTGCCATTGTTAATTCCTAGAATCAATAGAGAGAGGTGCCAAATCAATGGATACGAGATACCAGCTAAGACTAGAGTCATTATCAATGCATGGGCACTTGGAAGGAACCCTAAGTATTGGGTTGATGCTGAGAGTTTTCAACCTGAGAGGTTTCTTAACAGTTCCATTGATTTTAAGGGTACCAACTTTGAGTTTATTCCGTTTGGTGCTGGTAGGAGGATCTGCCCTGGCATTACATTTGCCACACCTAACTTTGAGTTGACACTTTCTCGATTGCTTTACCATTTTGATTGGAAGCTTCCCAACAATATGAAGATTGAAGAACTTGACATGACTGAGTCATATGGGGCTACTGCAGTAAGAAAAAGTGACCTATGCTTGATTCCCATTGTTTATAGGCCTTAA 1479 0.432 MELHNDPLSIYLITFFLFLLVLFKLFQKQDPNTKLPPGPRTLPLIGNIHQLVGSLTHHRLKILADKYGPLMHLKLGEVSNIIVTSREMAEEIMKTQDLNFSDRPNLISSRIVSYDATSISFAPHGDYWRLLRKLCTVELLTTKRVQSFRFIREEEVSELIKKVSASEGCVFNLSEHVYPLIYAIAARALFGKKSRYQEVFIKTIKKQLSLIGGFSVADLYPSIGVLQVRAKRKVEEVHREVDKVLQDIIDEHKNRKSEQRETVEDLVDVLLRFQSEYPLTEDNLKAVIQDMFIGGGETAASTVEWTMSEMIKNPNVMEKAQAEVRKVFGSKGYVDEAELHQLVYLKSVIKETMRLHPPVPLLIPRINRERCQINGYEIPAKTRVIINAWALGRNPKYWVDAESFQPERFLNSSIDFKGTNFEFIPFGAGRRICPGITFATPNFELTLSRLLYHFDWKLPNNMKIEELDMTESYGATAVRKSDLCLIPIVYRP 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g02006 492 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g02006 492 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g02006 492 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g02006 492 PANTHER CYTOCHROME P450 71D10 12 490 - -
Cca05g02006 492 Pfam Cytochrome P450 36 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g02006 492 PANTHER CYTOCHROME P450 71B11-RELATED 12 490 - -
Cca05g02006 492 Coils Coil 249 269 - -
Cca05g02006 492 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g02006 492 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g02006 492 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g02006 492 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g02006 492 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g02006 492 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g02006 492 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g02006 492 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g02006 492 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g02006 492 SUPERFAMILY Cytochrome P450 36 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g02006 492 Gene3D Cytochrome P450 28 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g02006 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g02006 Cca-Chr5 39934753 39945626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g02006 36 490 Cytochrome P450 AT3G26330 42.616 3.05e-131 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g02006 - K23806 gmx:102670080 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g02006 05 39934753 39945626 Cca05g02006 05 39934753 39945626 ECH